RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	SPPL2C	Q8IUH8	684 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	CENPL	Q8N0S6	344 aa	Predicted RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	ARMC10	Q8N2F6	343 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	CEP112	Q8N8E3	955 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	PTGR2	Q8N8N7	351 aa	Predicted RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	HUS1B	Q8NHY5	278 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	SLC44A1	Q8WWI5	657 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	TANK	Q92844	425 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	CSF3R	Q99062	836 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	MTERF1	Q99551	399 aa	Known RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	MAPKAP1	Q9BPZ7	522 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	RPF2	Q9H7B2	306 aa	Known RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	CHST11	Q9NPF2	352 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	DMRT3	Q9NQL9	472 aa		10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	LYAR	Q9NX58	379 aa	Known RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	PPIE	Q9UNP9	301 aa	Known RBP	10.21	□□□□□ -0.77
NPIPB4-222	ENST00000614197	FLNC	Q14315	2725 aa		10.21	□□□□□ -0.78
NPIPB4-222	ENST00000614197	DOCK10	Q96BY6	2186 aa		10.21	□□□□□ -0.78
NPIPB4-222	ENST00000614197	IQANK1	A0A1B0GTG1	560 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	EXOC1L	A0A1B0GW35	172 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197		H0YIV9	168 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	WWP2	O00308	870 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	CDC40	O60508	579 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	GUCY1B2	O75343	617 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	OR2J2	O76002	312 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SCEL	O95171	688 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	EPOR	P19235	508 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TAC1	P20366	129 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	GMPR	P36959	345 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	GPR143	P51810	404 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	HNRNPF	P52597	415 aa	Known RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	RPS13	P62277	151 aa	Known RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ID2	Q02363	134 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	IFT88	Q13099	833 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	E2F2	Q14209	437 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	C3AR1	Q16581	482 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	IL20RB	Q6UXL0	311 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	RTL4	Q6ZR62	310 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	GK5	Q6ZS86	529 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	GOLGA7	Q7Z5G4	137 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	CNTRL	Q7Z7A1	2325 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	NUDT13	Q86X67	352 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SULF2	Q8IWU5	870 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	IFT20	Q8IY31	132 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	CPSF7	Q8N684	471 aa	Known RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TMEM52	Q8NDY8	209 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	OR8K3	Q8NH51	312 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SLC22A8	Q8TCC7	542 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SLC2A12	Q8TD20	617 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	PHF21B	Q96EK2	531 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	CCDC120	Q96HB5	630 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	PAFAH2	Q99487	392 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SERPINI1	Q99574	410 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	NMRK1	Q9NWW6	199 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SCN3A	Q9NY46	2000 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	KCMF1	Q9P0J7	381 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	MYOT	Q9UBF9	498 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ENTPD4	Q9Y227	616 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TSC22D4	Q9Y3Q8	395 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ASB1	Q9Y576	335 aa		10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	USP9Y	O00507	2555 aa	Predicted RBP	10.2	□□□□□ -0.78
NPIPB4-222	ENST00000614197	MYOCOS	A0A1B0GUC4	107 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	STX16-NPEPL1	H3BU86	382 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	FOXE1	O00358	373 aa	Predicted RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	STX16	O14662	325 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	KLK8	O60259	260 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TBX6	O95947	436 aa	Predicted RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ALDOA	P04075	364 aa	Known RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197		P04436	131 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SNRPA	P09012	282 aa	Known RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	NR2F6	P10588	404 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	MTHFD2	P13995	350 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ALOX15	P16050	662 aa	Predicted RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	PTGS2	P35354	604 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	STT3A	P46977	705 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	RNF4	P78317	190 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TNFRSF17	Q02223	184 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TBL3	Q12788	808 aa	Known RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	CUL3	Q13618	768 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TECRL	Q5HYJ1	363 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	TEX35	Q5T0J7	233 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SP5	Q6BEB4	398 aa	Predicted RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ZNF793	Q6ZN11	406 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	RGS9BP	Q6ZS82	235 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SLC29A4	Q7RTT9	530 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	PAGE2	Q7Z2X7	111 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	UBE3D	Q7Z6J8	389 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SLC22A16	Q86VW1	577 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	PSD4	Q8NDX1	1056 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	MTBP	Q96DY7	904 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	SGCZ	Q96LD1	299 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	MRPL57	Q9BQC6	102 aa	Known RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	CNPPD1	Q9BV87	410 aa		10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	MRPL46	Q9H2W6	279 aa	Known RBP	10.19	□□□□□ -0.78
NPIPB4-222	ENST00000614197	ELOVL6	Q9H5J4	265 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms