RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 OR2T29Q8NH02 315 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 OR5J2Q8NH18 312 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 HMGB4Q8WW32 186 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 PIH1D2Q8WWB5 315 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 LINC01599Q8WXQ3 324 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 TRNT1Q96Q11 434 aaKnown RBP8.37□□□□□ -1.07
PDE6A-204ENST00000613228 KCNA7Q96RP8 456 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 TIMM29Q9BSF4 260 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 UCK2Q9BZX2 261 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 PDFQ9HBH1 243 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 NECTIN3Q9NQS3 549 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 COMMD9Q9P000 198 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 DNAJC15Q9Y5T4 150 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 PLXNB2O15031 1838 aa8.37□□□□□ -1.07
PDE6A-204ENST00000613228 ARNTLO00327 626 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 HOXC11O43248 304 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CYP7B1O75881 506 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 KLK1P06870 262 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CASP3P42574 277 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 HSPB3Q12988 150 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 METTL25Q8N6Q8 603 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 ABHD11Q8NFV4 315 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SNAPC3Q92966 411 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CRELD1Q96HD1 420 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TM9SF2Q99805 663 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SDR39U1Q9NRG7 319 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 COQ3Q9NZJ6 369 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 NME7Q9Y5B8 376 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 BLACEA4D250 179 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 FOXD2O60548 495 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 NUDT7P0C024 238 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 NCK1P16333 377 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TMEM52BQ4KMG9 183 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 C2orf27AQ580R0 203 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 AGAP6Q5VW22 663 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 XAGE5Q8WWM1 108 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 PTERQ96BW5 349 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 AGAP4Q96P64 663 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 C17orf62Q9BQA9 187 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 HEBP1Q9NRV9 189 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TNFRSF10DQ9UBN6 386 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 BTNL2Q9UIR0 455 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CD207Q9UJ71 328 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 RAB19A4D1S5 217 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 HMX3A6NHT5 357 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 WASH3PC4AMC7 463 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 M0R233 179 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SLITRK5O94991 958 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 F7P08709 466 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 KCNC1P48547 511 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 RGS8P57771 180 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CGB2Q6NT52 195 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TCTEX1D2Q8WW35 142 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 PYCR2Q96C36 320 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SH3YL1Q96HL8 342 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 KCNC2Q96PR1 638 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TPT1P8Q9HAU6 139 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SMOXQ9NWM0 555 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 UTS2RQ9UKP6 389 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 STOMP27105 288 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 MAT2AP31153 395 aaKnown RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 PREPP48147 710 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TBPL1P62380 186 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SH3BP2P78314 561 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 MRPS21P82921 87 aaKnown RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 FLI1Q01543 452 aaPredicted RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 KLHL22Q53GT1 634 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 IGSF11Q5DX21 431 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 PIGGQ5H8A4 983 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 UBAP2Q5T6F2 1119 aaKnown RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CHST14Q8NCH0 376 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 OR2L2Q8NH16 312 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 METTL21AQ8WXB1 218 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 GTF2H4Q92759 462 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 NXPE3Q969Y0 559 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 CREB3L1Q96BA8 519 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TESCQ96BS2 214 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 GFM1Q96RP9 751 aaKnown RBP8.36□□□□□ -1.07
PDE6A-204ENST00000613228 LYSMD1Q96S90 227 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 ATOH8Q96SQ7 321 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SLC30A2Q9BRI3 323 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 SLCO3A1Q9UIG8 710 aa8.36□□□□□ -1.07
PDE6A-204ENST00000613228 TCRBV21S2A2A0A5A6 115 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 AK1P00568 194 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 PLATP00750 562 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 TGFB1P01137 390 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 CA3P07451 260 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 ACPPP15309 386 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 OPRL1P41146 370 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 CTSKP43235 329 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 ABRAXAS2Q15018 415 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 AAK1Q2M2I8 961 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 NANOGP8Q6NSW7 305 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 ANKRD46Q86W74 232 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 C2orf73Q8N5S3 287 aaPredicted RBP8.35□□□□□ -1.07
PDE6A-204ENST00000613228 SLC37A3Q8NCC5 494 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 KLHL6Q8WZ60 621 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
PDE6A-204ENST00000613228 NSUN5Q96P11 429 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms