RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ONECUT2O95948 504 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 RECKO95980 971 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 NPPAP01160 153 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SLC35G6P0C7Q6 338 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SLC6A2P23975 617 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SLC7A1P30825 629 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 KCNK10P57789 538 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 UFM1P61960 85 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 MC1RQ01726 317 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 MEF2AQ02078 507 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 IRF8Q02556 426 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 VAC14Q08AM6 782 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SRSF6Q13247 344 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LAPTM5Q13571 262 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 PWP1Q13610 501 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 FAM53BQ14153 422 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 E2F2Q14209 437 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TLR1Q15399 786 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LRRC36Q1X8D7 754 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 HKDC1Q2TB90 917 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 NKAIN1Q4KMZ8 207 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ATP6AP1LQ52LC2 224 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CRTC2Q53ET0 693 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 XKR6Q5GH73 641 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 PAGE2BQ5JRK9 111 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 C1orf189Q5VU69 101 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TMEM154Q6P9G4 183 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 FAM199XQ6PEV8 388 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 INO80CQ6PI98 192 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SCIMPQ6UWF3 145 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 GOLM1Q8NBJ4 401 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TRPV3Q8NET8 790 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CT55Q8WUE5 264 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SNRNP27Q8WVK2 155 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 MIEF2Q96C03 454 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LRRC58Q96CX6 371 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 WDR34Q96EX3 536 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 C10orf90Q96M02 699 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LRGUKQ96M69 825 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 PKP2Q99959 881 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SLC39A3Q9BRY0 314 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 EFCAB11Q9BUY7 163 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 NTMT1Q9BV86 223 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 VCXQ9H320 206 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SYNPO2LQ9H987 977 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 GEMIN8Q9NWZ8 242 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CMTM6Q9NX76 183 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CNOT11Q9UKZ1 510 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CDC14AQ9UNH5 594 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 RUVBL1Q9Y265 456 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 FARSAQ9Y285 508 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DTNAQ9Y4J8 743 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 PCDHA9Q9Y5H5 950 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DPPA5A6NC42 116 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 URADA6NGE7 173 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 AQP12BA6NM10 295 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 H0YJX3 145 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ANKRD28O15084 1053 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 P2RX6O15547 441 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DENRO43583 198 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 UGDHO60701 494 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ALBP02768 609 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LYNP07948 512 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 EPORP19235 508 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 F8A1P23610 371 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 IL12AP29459 219 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 HTR6P50406 440 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 POLR2JP52435 117 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CXADRP78310 365 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 RGS1Q08116 209 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 BNIP2Q12982 314 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 CHIT1Q13231 466 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DOC2AQ14183 400 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SLBPQ14493 270 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ABRAXAS2Q15018 415 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 NCF4Q15080 339 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 HIST2H2ACQ16777 129 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 GRAMD1BQ3KR37 738 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 IL23RQ5VWK5 629 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 HIST2H2AA3Q6FI13 130 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 OR52E8Q6IFG1 317 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LCN10Q6JVE6 187 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 FAM198BQ6UWH4 519 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TMIGD1Q6UXZ0 262 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TRIM46Q7Z4K8 759 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 MILR1Q7Z6M3 343 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DHFR2Q86XF0 187 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 AQP12AQ8IXF9 295 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ARHGEF39Q8N4T4 335 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DPP10Q8N608 796 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 FNDC5Q8NAU1 212 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ICA1LQ8NDH6 482 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF740Q8NDX6 193 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 STARD8Q92502 1023 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 UBE2E3Q969T4 207 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ATP6V1E2Q96A05 226 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TMEM125Q96AQ2 219 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 SLCO4A1Q96BD0 722 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms