RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 BMP1P13497 986 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PTPN2P17706 415 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 MASP1P48740 699 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 NKX3-2P78367 333 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CSTF1Q05048 431 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GAB1Q13480 694 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 INAVAQ3KP66 663 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SYT6Q5T7P8 510 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 KDM4DQ6B0I6 523 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GRHL2Q6ISB3 625 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF367Q7RTV3 350 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GRASPQ7Z6J2 395 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SIX5Q8N196 739 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 C10orf111Q8N326 155 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 DNAJC22Q8N4W6 341 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 DENND6BQ8NEG7 585 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GATAD2BQ8WXI9 593 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RELTQ969Z4 430 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ITPKCQ96DU7 683 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CNDP2Q96KP4 475 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 MACROD1Q9BQ69 325 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 WACQ9BTA9 647 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 MND1Q9BWT6 205 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 MMP28Q9H239 520 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 IGFLR1Q9H665 355 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PAQR5Q9NXK6 330 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ING3Q9NXR8 418 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SBF1O95248 1867 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 DICER1Q9UPY3 1922 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 A6NL46 340 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM170BA6NMN3 283 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GNB5O14775 395 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TGM5O43548 720 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FRS3O43559 492 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FGF18O76093 207 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ADH1CP00326 375 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC10A3P09131 477 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ADORA3P0DMS8 318 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RHCEP18577 417 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PCGF2P35227 344 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 NRIP1P48552 1158 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CCR4P51679 360 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CCR8P51685 355 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PCDH1Q08174 1060 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RBBP4Q09028 425 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FADDQ13158 208 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 KCNC3Q14003 757 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GNA13Q14344 377 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 OXA1LQ15070 435 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CTF1Q16619 201 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF805Q5CZA5 627 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FRMPD2BQ6IN97 320 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PSRC1Q6PGN9 363 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 DHRS4L2Q6PKH6 230 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 HSDL2Q6YN16 418 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM92BQ6ZTR7 304 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 OLIG3Q7RTU3 272 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 METTL4Q8N3J2 472 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TMEM145Q8NBT3 493 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ADAMTS16Q8TE57 1224 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ZNF480Q8WV37 535 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CCDC3Q9BQI4 270 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 NEURL2Q9BR09 285 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TMEM246Q9BRR3 403 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 HDHD5Q9BXW7 423 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC46A2Q9BY10 475 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TTTY10Q9BZA0 68 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CPNE5Q9HCH3 593 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ADAP2Q9NPF8 381 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SPHK2Q9NRA0 654 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SEC14L4Q9UDX3 406 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TMEFF2Q9UIK5 374 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ERVW-1Q9UQF0 538 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ERVK-11Q9UQG0 969 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ZFC3H1O60293 1989 aaKnown RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 H3BNC9 293 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ANKRD28O15084 1053 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 ZDHHC11BP0C7U3 371 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 MAPK9P45984 424 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CDH11P55287 796 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RAB14P61106 215 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 BCL7AQ4VC05 210 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GTF2IRD2BQ6EKJ0 949 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PNCKQ6P2M8 343 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 GTF2IRD2Q86UP8 949 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TRAM1L1Q8N609 369 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CELF2-AS1Q8N7Q2 184 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RASGEF1AQ8N9B8 481 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 OR5D16Q8NGK9 328 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 PIGXQ8TBF5 258 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RASSF5Q8WWW0 418 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 JPH3Q8WXH2 748 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 CLIP3Q96DZ5 547 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 EPYCQ99645 322 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 SLC6A16Q9GZN6 736 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 RACGAP1Q9H0H5 632 aa6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 TP63Q9H3D4 680 aaPredicted RBP6.56□□□□□ -1.36
SYNPO2-206ENST00000610556 DUSP21Q9H596 190 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms