RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PROS1P07225 676 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 CCDC159P0C7I6 412 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 ITGAMP11215 1152 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 GLB1P16278 677 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 GPX2P18283 190 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 PPIBP23284 216 aaKnown RBP11.12□□□□□ -0.63
VRK3-223ENST00000601341 MPLP40238 635 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 KIR3DL1P43629 444 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 PHC1P78364 1004 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 ACSM2AQ08AH3 577 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 PMS2P3Q13401 168 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 SPIN4Q56A73 249 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 ACSM2BQ68CK6 577 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 NOXRED1Q6NXP6 359 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 SHQ1Q6PI26 577 aaKnown RBP11.12□□□□□ -0.63
VRK3-223ENST00000601341 ENPP6Q6UWR7 440 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 TRIM73Q86UV7 250 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 PAQR7Q86WK9 346 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 GATAD2AQ86YP4 633 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 OFCC1Q8IZS5 231 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 OR4C6Q8NH72 309 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 RAB2BQ8WUD1 216 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 FBLIM1Q8WUP2 373 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 C11orf24Q96F05 449 aaPredicted RBP11.12□□□□□ -0.63
VRK3-223ENST00000601341 IL21RQ9HBE5 538 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 CORO2BQ9UQ03 480 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 RUVBL1Q9Y265 456 aaKnown RBP11.12□□□□□ -0.63
VRK3-223ENST00000601341 DLGAP4Q9Y2H0 992 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 NAALAD2Q9Y3Q0 740 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 KLK4Q9Y5K2 254 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 RNF215Q9Y6U7 377 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 R4GN57 208 aa11.12□□□□□ -0.63
VRK3-223ENST00000601341 A0A0J9YY10 115 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 OR2A25A4D2G3 310 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 GNGT2O14610 69 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 HAT1O14929 419 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 LCMT2O60294 686 aaKnown RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 CLEC3AO75596 197 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 MYO1DO94832 1006 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 SEC24DO94855 1032 aaPredicted RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 ETHE1O95571 254 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 MT-ND1P03886 318 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 ABCB1P08183 1280 aaPredicted RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 MAGP20916 626 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 AHRP35869 848 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 DCTP40126 519 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 GPR3P46089 330 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 ASMTP46597 345 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 CAPZBP47756 277 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 CXCR4P61073 352 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 RELAQ04206 551 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 VEZF1Q14119 521 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 NKG7Q16617 165 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 FIGLAQ6QHK4 219 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 LINC00299Q6ZSB3 139 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 GPR155Q7Z3F1 870 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 VN1R5Q7Z5H4 357 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PLD3Q8IV08 490 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 SETD9Q8NE22 299 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 FBXO30Q8TB52 745 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 APIPQ96GX9 242 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 APOLD1Q96LR9 279 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PHF12Q96QT6 1004 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 GPN2Q9H9Y4 310 aaPredicted RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 GMEB2Q9UKD1 530 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 POMT2Q9UKY4 750 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 KLHL20Q9Y2M5 609 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PCDHGB1Q9Y5G3 927 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PCM1Q15154 2024 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 CABIN1Q9Y6J0 2220 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 H3BMQ9 156 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 KHNYNO15037 678 aaKnown RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 PCDHGA12O60330 932 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 UGT2B11O75310 529 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 SH3BGRLO75368 114 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 CLIC3O95833 236 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 ALDH4A1P30038 563 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 BCL6P41182 706 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 PPM1FP49593 454 aaPredicted RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 ARHGDIAP52565 204 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 EMP3P54852 163 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 RPS15AP62244 130 aaKnown RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 CYP4F2P78329 520 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 C6orf141Q5SZD1 244 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 KHDRBS2Q5VWX1 349 aaKnown RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 CPZQ66K79 652 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 ZNF438Q7Z4V0 828 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 C1orf52Q8N6N3 182 aaKnown RBP11.11□□□□□ -0.63
VRK3-223ENST00000601341 FAM86B1Q8N7N1 296 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 OR6C4Q8NGE1 309 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 FAM81AQ8TBF8 368 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 CHTF18Q8WVB6 975 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 NCLNQ969V3 563 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 COG8Q96MW5 612 aa11.11□□□□□ -0.63
VRK3-223ENST00000601341 MBOAT4Q96T53 435 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms