RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 RTL4Q6ZR62 310 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 DMRTC2Q8IXT2 367 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 LAS2Q8IYD9 372 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 TMEM251Q8N6I4 163 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 GOLM1Q8NBJ4 401 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 PYROXD1Q8WU10 500 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 TSPAN17Q96FV3 270 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 SGCZQ96LD1 299 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 KRT12Q99456 494 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 CPNE1Q99829 537 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 FAM173AQ9BQD7 235 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 ROGDIQ9GZN7 287 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 COPS7BQ9H9Q2 264 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 IL1RL2Q9HB29 575 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 SH2D2AQ9NP31 389 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 CD274Q9NZQ7 290 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 TNFRSF10DQ9UBN6 386 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 FAM215AQ9Y5M1 114 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 ZFHX3Q15911 3703 aa16.65■□□□□ 0.26
CHMP2A-208ENST00000601220 OR14I1A6ND48 311 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 FAM90A27PA6NNH2 459 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 IGKV3-11P04433 115 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 CELA3AP09093 270 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 STMN1P16949 149 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 HIST1H1TP22492 207 aaPredicted RBP16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 MSH2P43246 934 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 GPX6P59796 221 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 GNG11P61952 73 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 PLGLB1Q02325 96 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 IRF8Q02556 426 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 TGM3Q08188 693 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 MPEG1Q2M385 716 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 PIGGQ5H8A4 983 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 ADGRD1Q6QNK2 874 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 LYPD8Q6UX82 237 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 ACAD11Q709F0 780 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 TRILQ7L0X0 811 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 ISCA2Q86U28 154 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 SLC22A16Q86VW1 577 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 SRFBP1Q8NEF9 429 aaKnown RBP16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 OR5L2Q8NGL0 311 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 OR5M9Q8NGP3 310 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 SAYSD1Q9NPB0 183 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 KCNJ16Q9NPI9 418 aa16.64■□□□□ 0.25
CHMP2A-208ENST00000601220 ACOT7O00154 380 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 FGF17O60258 216 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 CCNT2O60583 730 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 HOXD4P09016 255 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 CCL3P10147 92 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 TNNI3P19429 210 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 GP5P40197 560 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 MAGEA5P43359 124 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 RAB10P61026 200 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 HIST2H2ACQ16777 129 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 ZNF791Q3KP31 576 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 TMEM35AQ53FP2 167 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 PAGE2BQ5JRK9 111 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 HIST2H2AA3Q6FI13 130 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 DGAT2L6Q6ZPD8 337 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 GK5Q6ZS86 529 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 LRRC70Q7Z2Q7 622 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 OR4N5Q8IXE1 308 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 FAM109AQ8N4B1 249 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 BBOF1Q8ND07 529 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 SENP5Q96HI0 755 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 NAPGQ99747 312 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 TTYH2Q9BSA4 534 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 SORBS1Q9BX66 1292 aaKnown RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 TUBA8Q9NY65 449 aaPredicted RBP16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 GRHL1Q9NZI5 618 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 WHRNQ9P202 907 aa16.63■□□□□ 0.25
CHMP2A-208ENST00000601220 HRKO00198 91 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 BCKDKO14874 412 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 SH3BGRLO75368 114 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 FAM155BO75949 473 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 NADKO95544 446 aaPredicted RBP16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 TGFB1P01137 390 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 SLC35E2BP0CK96 405 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 GLI4P10075 376 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 ACVR2AP27037 513 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 STT3AP46977 705 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 DNASE1L1P49184 302 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 OPN5Q6U736 354 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 C3orf62Q6ZUJ4 267 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 C9orf40Q8IXQ3 194 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 RNF175Q8N4F7 328 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 OR7G3Q8NG95 312 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 NUBPLQ8TB37 319 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 UBTD2Q8WUN7 234 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 CDKL2Q92772 493 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 ATOH8Q96SQ7 321 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 ERP44Q9BS26 406 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 ALG9Q9H6U8 611 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 IGSF5Q9NSI5 407 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
CHMP2A-208ENST00000601220 RNF14Q9UBS8 474 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms