RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 TAS2R50P59544 299 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 ZNF33BQ06732 778 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 ASPHQ12797 758 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 ELAVL1Q15717 326 aaKnown RBP15.76■□□□□ 0.11
TRIM28-215ENST00000601150 PLEKHN1Q494U1 663 aaPredicted RBP15.76■□□□□ 0.11
TRIM28-215ENST00000601150 FAM219BQ5XKK7 198 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 CROCCP2Q86T23 111 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 METTL4Q8N3J2 472 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 GBP7Q8N8V2 638 aaPredicted RBP15.76■□□□□ 0.11
TRIM28-215ENST00000601150 Q8NA96 180 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 DNAJB14Q8TBM8 379 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 TCP10LQ8TDR4 215 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 ELP5Q8TE02 316 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 TANKQ92844 425 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 ZIM3Q96PE6 472 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 HBEGFQ99075 208 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 ALOXE3Q9BYJ1 711 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 TRIM4Q9C037 500 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 WDR41Q9HAD4 459 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 LUZP4Q9P127 313 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 SLC17A7Q9P2U7 560 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 CSAG2Q9Y5P2 127 aa15.76■□□□□ 0.11
TRIM28-215ENST00000601150 BSNQ9UPA5 3926 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 A0A1W2PR48 441 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 TRIM13O60858 407 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 KLK1P06870 262 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 NR2F6P10588 404 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 MLLT10P55197 1068 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 ARG2P78540 354 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 ACER2Q5QJU3 275 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 CEP85LQ5SZL2 805 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 CCNYL2Q5T2Q4 361 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 C18orf63Q68DL7 685 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 COMMD6Q7Z4G1 85 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 CRLF3Q8IUI8 442 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 TMEM132CQ8N3T6 1108 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 KIF2BQ8N4N8 673 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 SLC5A8Q8N695 610 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 B3GNT7Q8NFL0 401 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 HAS2Q92819 552 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 ANKRD9Q96BM1 317 aaPredicted RBP15.75■□□□□ 0.11
TRIM28-215ENST00000601150 CNDP1Q96KN2 507 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 KCNA7Q96RP8 456 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 RNF32Q9H0A6 362 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 PLA2G3Q9NZ20 509 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 STMN3Q9NZ72 180 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 VPS29Q9UBQ0 182 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 VTI1BQ9UEU0 232 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 TIMM22Q9Y584 194 aa15.75■□□□□ 0.11
TRIM28-215ENST00000601150 MYOCOSA0A1B0GUC4 107 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 FGF17O60258 216 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 CRCPO75575 148 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 CREB1P16220 341 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 TPP2P29144 1249 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 ALDH3A1P30838 453 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 HTR6P50406 440 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 MAPK12P53778 367 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 IGLV3-21P80748 117 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 ID2Q02363 134 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 GALNT1Q10472 559 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 TBL3Q12788 808 aaKnown RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 BIKQ13323 160 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 ZNF169Q14929 603 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 TLR1Q15399 786 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 MEP1AQ16819 746 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 FCRLBQ6BAA4 426 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 LRIG3Q6UXM1 1119 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 CUZD1Q86UP6 607 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 LGI4Q8N135 537 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 DAZLQ92904 295 aaKnown RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 VMP1Q96GC9 406 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 TRMOQ9BU70 441 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 GATA5Q9BWX5 397 aaPredicted RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 CENPHQ9H3R5 247 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 ABI3Q9P2A4 366 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 PPIEQ9UNP9 301 aaKnown RBP15.74■□□□□ 0.11
TRIM28-215ENST00000601150 CLCA3PQ9Y6N3 262 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 CNTRLQ7Z7A1 2325 aa15.74■□□□□ 0.11
TRIM28-215ENST00000601150 FASNP49327 2511 aaKnown RBP15.73■□□□□ 0.11
TRIM28-215ENST00000601150 GCN1Q92616 2671 aaKnown RBP15.73■□□□□ 0.11
TRIM28-215ENST00000601150 SERTM1A2A2V5 107 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 TYROBPO43914 113 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 GUCY1B2O75343 617 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 PRKRAO75569 313 aaKnown RBP15.73■□□□□ 0.11
TRIM28-215ENST00000601150 AIFM1O95831 613 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 WDPCPO95876 746 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 CHN1P15882 459 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 TNNI3P19429 210 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 CLCN2P51788 898 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 FOXA1P55317 472 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 FOLH1Q04609 750 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 INPP5JQ15735 1006 aaPredicted RBP15.73■□□□□ 0.11
TRIM28-215ENST00000601150 OR52E8Q6IFG1 317 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 OR4N5Q8IXE1 308 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
TRIM28-215ENST00000601150 APCDD1LQ8NCL9 501 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 MORN4Q8NDC4 146 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 CATSPER1Q8NEC5 780 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 OR14A16Q8NHC5 309 aa15.73■□□□□ 0.11
TRIM28-215ENST00000601150 CPT1CQ8TCG5 803 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms