RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	PYGB	P11216	843 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	TSPAN8	P19075	237 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	TAC1	P20366	129 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	CDH13	P55290	713 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	HERVK_113	P63132	956 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	IGLV3-21	P80748	117 aa	Predicted RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	PMP22	Q01453	160 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	TNFRSF17	Q02223	184 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	ID2	Q02363	134 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	OC90	Q02509	493 aa	Predicted RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	STX4	Q12846	297 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	ELOA	Q14241	798 aa	Known RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	UNC50	Q53HI1	259 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	C18orf63	Q68DL7	685 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	SPINK14	Q6IE38	97 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	LETMD1	Q6P1Q0	360 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	MILR1	Q7Z6M3	343 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	GPR180	Q86V85	440 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	PTPMT1	Q8WUK0	201 aa	Predicted RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	UBLCP1	Q8WVY7	318 aa	Predicted RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	MTFMT	Q96DP5	389 aa	Known RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	SCMH1	Q96GD3	660 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	SERPINI1	Q99574	410 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	ERVK-6	Q9BXR3	956 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	TRIM45	Q9H8W5	580 aa	Predicted RBP	14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	ZNF225	Q9UK10	706 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	ATG4B	Q9Y4P1	393 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948	ASB4	Q9Y574	426 aa		14.43	□□□□□ -0.1
PLD3-223	ENST00000600948		A0A1W2PPM1	405 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	FOXO6	A8MYZ6	492 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	FCHO1	O14526	889 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	PROM1	O43490	865 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	PRKN	O60260	465 aa	Predicted RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	PRKRA	O75569	313 aa	Known RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	SEMA3D	O95025	777 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	DDAH2	O95865	285 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	OTC	P00480	354 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	RNF224	P0DH78	156 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	ATP5F1	P24539	256 aa	Predicted RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	TRHR	P34981	398 aa	Predicted RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	HSD17B3	P37058	310 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	IFT88	Q13099	833 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	ZNF678	Q5SXM1	525 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	C10orf62	Q5T681	223 aa	Predicted RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	FAM219B	Q5XKK7	198 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	TTC19	Q6DKK2	380 aa	Predicted RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	SH2D5	Q6ZV89	423 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	ZNF227	Q86WZ6	799 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	NUDT13	Q86X67	352 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	TDRP	Q86YL5	185 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	MORN4	Q8NDC4	146 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	MYRIP	Q8NFW9	859 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	OR14A16	Q8NHC5	309 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	DNAJB8	Q8NHS0	232 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	TRPC4AP	Q8TEL6	797 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	THAP3	Q8WTV1	239 aa	Predicted RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	DAZL	Q92904	295 aa	Known RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	PSMG3-AS1	Q96PY0	264 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	TMEM237	Q96Q45	408 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	RPF2	Q9H7B2	306 aa	Known RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	KLHL1	Q9NR64	748 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	LYAR	Q9NX58	379 aa	Known RBP	14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	LRFN1	Q9P244	771 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	TRPS1	Q9UHF7	1281 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	CLCA3P	Q9Y6N3	262 aa		14.42	□□□□□ -0.1
PLD3-223	ENST00000600948	DOPEY1	Q5JWR5	2465 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948		A0A1W2PR48	441 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	TMEM200C	A6NKL6	621 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	ZFAND5	O76080	213 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	CRYAB	P02511	175 aa	Known RBP	14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	SP1	P08047	785 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	FAM58BP	P0C7Q3	252 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	CD46	P15529	392 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	MST1	P26927	711 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	BUD31	P41223	144 aa	Predicted RBP	14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	HLCS	P50747	726 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	CLC	Q05315	142 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	SRSF11	Q05519	484 aa	Known RBP	14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	SLC25A25	Q6KCM7	469 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	OR4N5	Q8IXE1	308 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	HORMAD2	Q8N7B1	307 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	ZNF321P	Q8N8H1	164 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	TMEM178A	Q8NBL3	297 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	SSC4D	Q8WTU2	575 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	TANK	Q92844	425 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	C5orf34	Q96MH7	638 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	MRPL1	Q9BYD6	325 aa	Known RBP	14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	PPCS	Q9HAB8	311 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	FARSB	Q9NSD9	589 aa	Known RBP	14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	ERRFI1	Q9UJM3	462 aa	Predicted RBP	14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	EMCN	Q9ULC0	261 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	EML6	Q6ZMW3	1958 aa		14.41	□□□□□ -0.1
PLD3-223	ENST00000600948	UTP20	O75691	2785 aa	Known RBP	14.4	□□□□□ -0.1
PLD3-223	ENST00000600948	ASPDH	A6ND91	283 aa		14.4	□□□□□ -0.1
PLD3-223	ENST00000600948	C17orf105	B2RV13	164 aa		14.4	□□□□□ -0.1
PLD3-223	ENST00000600948	ITGA10	O75578	1167 aa		14.4	□□□□□ -0.1
PLD3-223	ENST00000600948	SLC25A12	O75746	678 aa		14.4	□□□□□ -0.1
PLD3-223	ENST00000600948	SUPT7L	O94864	414 aa		14.4	□□□□□ -0.1
PLD3-223	ENST00000600948	OR4F21	O95013	312 aa		14.4	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms