RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 LYARQ9NX58 379 aaKnown RBP13.36□□□□□ -0.27
IRF3-224ENST00000599680 COPS7AQ9UBW8 275 aa13.36□□□□□ -0.27
IRF3-224ENST00000599680 VTI1BQ9UEU0 232 aa13.36□□□□□ -0.27
IRF3-224ENST00000599680 ERVK-11Q9UQG0 969 aa13.36□□□□□ -0.27
IRF3-224ENST00000599680 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
IRF3-224ENST00000599680 CENPEQ02224 2701 aa13.36□□□□□ -0.27
IRF3-224ENST00000599680 C17orf105B2RV13 164 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 PLPP1O14494 284 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 NME2P1O60361 137 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 STSP08842 583 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 TAC1P20366 129 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 NME2P22392 152 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 TRHRP34981 398 aaPredicted RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 CASP6P55212 293 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 ID2Q02363 134 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 IFT88Q13099 833 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 ZNF468Q5VIY5 522 aaPredicted RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 HSDL2Q6YN16 418 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 MAMDC2Q7Z304 686 aaPredicted RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 L3MBTL4Q8NA19 623 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 MTFMTQ96DP5 389 aaKnown RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 MAGED4Q96JG8 741 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 DGAT2Q96PD7 388 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 CDK15Q96Q40 435 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 SERPINI1Q99574 410 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 RPF2Q9H7B2 306 aaKnown RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 SEMA4BQ9NPR2 832 aaPredicted RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 SUCOQ9UBS9 1254 aaKnown RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 PCTPQ9UKL6 214 aa13.35□□□□□ -0.27
IRF3-224ENST00000599680 PPIEQ9UNP9 301 aaKnown RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 KLF13Q9Y2Y9 288 aaPredicted RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 YARS2Q9Y2Z4 477 aaKnown RBP13.35□□□□□ -0.27
IRF3-224ENST00000599680 TRGV8A0A0C4DH27 118 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 IQANK1A0A1B0GTG1 560 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 WIPF3A6NGB9 483 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 OR7A17O14581 309 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 RIPK2O43353 540 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 ZNF24P17028 368 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 NEK2P51955 445 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 PLIN5Q00G26 463 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 TNFRSF17Q02223 184 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 BIKQ13323 160 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 CUL3Q13618 768 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.27
IRF3-224ENST00000599680 KRTCAP3Q53RY4 240 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 NUDT13Q86X67 352 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 ARMC10Q8N2F6 343 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 ZCCHC7Q8N3Z6 543 aaKnown RBP13.34□□□□□ -0.27
IRF3-224ENST00000599680 OR52B6Q8NGF0 335 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 PTPMT1Q8WUK0 201 aaPredicted RBP13.34□□□□□ -0.27
IRF3-224ENST00000599680 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
IRF3-224ENST00000599680 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 TANKQ92844 425 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
IRF3-224ENST00000599680 FRMD6Q96NE9 622 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 NTMT1Q9BV86 223 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 TSPAN10Q9H1Z9 355 aaPredicted RBP13.34□□□□□ -0.27
IRF3-224ENST00000599680 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 SH3BGRL2Q9UJC5 107 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 ZNF223Q9UK11 482 aaPredicted RBP13.34□□□□□ -0.27
IRF3-224ENST00000599680 CLDN16Q9Y5I7 305 aa13.34□□□□□ -0.27
IRF3-224ENST00000599680 ARHGAP10A1A4S6 786 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 ASPDHA6ND91 283 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 A8MVJ9 347 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 NPIPA5E9PKD4 350 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 FOXE1O00358 373 aaPredicted RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 FGF17O60258 216 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 OR2J2O76002 312 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 OTCP00480 354 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 FAM58BPP0C7Q3 252 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 GPR143P51810 404 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 C10orf62Q5T681 223 aaPredicted RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 FRG2Q64ET8 278 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 MILR1Q7Z6M3 343 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 OR4N5Q8IXE1 308 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 CNPY4Q8N129 248 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 CPSF7Q8N684 471 aaKnown RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 OR5L2Q8NGL0 311 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 WDR20Q8TBZ3 569 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 SLC2A12Q8TD20 617 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 ART5Q96L15 291 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 GPR137Q96N19 417 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 NSUN5Q96P11 429 aaKnown RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 FRG2BQ96QU4 278 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 ELOVL6Q9H5J4 265 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 TRIM45Q9H8W5 580 aaPredicted RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 HPF1Q9NWY4 346 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 AHSPQ9NZD4 102 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 PSMC3IPQ9P2W1 217 aaPredicted RBP13.33□□□□□ -0.28
IRF3-224ENST00000599680 NPIPA1Q9UND3 350 aa13.33□□□□□ -0.28
IRF3-224ENST00000599680 CYSRT1A8MQ03 144 aa13.32□□□□□ -0.28
IRF3-224ENST00000599680 A8MT66 165 aa13.32□□□□□ -0.28
IRF3-224ENST00000599680 WWP2O00308 870 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms