RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 SLC5A8Q8N695 610 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 EFCAB3Q8N7B9 438 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 C7orf57Q8NEG2 295 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 DNAJB14Q8TBM8 379 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 SNRNP40Q96DI7 357 aaKnown RBP15.07■□□□□ 0
TRIM28-213ENST00000598355 ZNF354BQ96LW1 612 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 MRPL1Q9BYD6 325 aaKnown RBP15.07■□□□□ 0
TRIM28-213ENST00000598355 ELOVL6Q9H5J4 265 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 OXSMQ9NWU1 459 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 FBXW2Q9UKT8 454 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 NTNG1Q9Y2I2 539 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 LRRK2Q5S007 2527 aa15.07■□□□□ 0
TRIM28-213ENST00000598355 TRAV17A0A0B4J275 112 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 SERTM1A2A2V5 107 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 CLEC18AA5D8T8 446 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 H3BQF6 201 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 MANBAO00462 879 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 UBFD1O14562 309 aaKnown RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 FGF17O60258 216 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 MAN1A2O60476 641 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 LDB3O75112 727 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 MYO1DO94832 1006 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 ESRRBO95718 433 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 ENO1P06733 434 aaKnown RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 FAM58BPP0C7Q3 252 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 ARG2P78540 354 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 CSTF3Q12996 717 aaKnown RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 PCLAFQ15004 111 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 MEP1AQ16819 746 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 TCHHL1Q5QJ38 904 aaPredicted RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 C18orf63Q68DL7 685 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 TTC19Q6DKK2 380 aaPredicted RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 CLEC18BQ6UXF7 455 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 CLNKQ7Z7G1 428 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 BEST3Q8N1M1 668 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 CDYL2Q8N8U2 506 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 CLEC18CQ8NCF0 446 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 GALNT11Q8NCW6 608 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 MDS2Q8NDY4 140 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 SELENOMQ8WWX9 145 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 C11orf24Q96F05 449 aaPredicted RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 VMP1Q96GC9 406 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 C12orf65Q9H3J6 166 aaKnown RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 RPF2Q9H7B2 306 aaKnown RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 TRIM45Q9H8W5 580 aaPredicted RBP15.06■□□□□ 0
TRIM28-213ENST00000598355 MID2Q9UJV3 735 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 PLLPQ9Y342 182 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 PCDHGB6Q9Y5F9 930 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 PTPN13Q12923 2485 aa15.06■□□□□ 0
TRIM28-213ENST00000598355 EXPH5Q8NEV8 1989 aa15.05■□□□□ 0
TRIM28-213ENST00000598355 A0A1W2PR48 441 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 TLDC2A0PJX2 215 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 AIFM1O95831 613 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 KRT6AP02538 564 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 KRT6BP04259 564 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 NR2F6P10588 404 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 BUD31P41223 144 aaPredicted RBP15.05■□□□□ -0
TRIM28-213ENST00000598355 KRT6CP48668 564 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 HTR6P50406 440 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 TAS2R50P59544 299 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 IFFO1Q0D2I5 559 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 BIKQ13323 160 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 LIPMQ5VYY2 423 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 FCRLBQ6BAA4 426 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 COMMD6Q7Z4G1 85 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 CATSPER1Q8NEC5 780 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 OR14A16Q8NHC5 309 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 PTPMT1Q8WUK0 201 aaPredicted RBP15.05■□□□□ -0
TRIM28-213ENST00000598355 TANKQ92844 425 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 MTFMTQ96DP5 389 aaKnown RBP15.05■□□□□ -0
TRIM28-213ENST00000598355 CNDP1Q96KN2 507 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 ALOXE3Q9BYJ1 711 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 CLMPQ9H6B4 373 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 PNO1Q9NRX1 252 aaKnown RBP15.05■□□□□ -0
TRIM28-213ENST00000598355 PLA2G3Q9NZ20 509 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 STMN3Q9NZ72 180 aa15.05■□□□□ -0
TRIM28-213ENST00000598355 A8MUA0 341 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 PRKRAO75569 313 aaKnown RBP15.04■□□□□ -0
TRIM28-213ENST00000598355 DDAH2O95865 285 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 CPA3P15088 417 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 STT3AP46977 705 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 CLCN2P51788 898 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 NAGLUP54802 743 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 MLF1P58340 268 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 FOLH1Q04609 750 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 ZNF844Q08AG5 666 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 STX4Q12846 297 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 TUBA3CQ13748 450 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 TUBA3EQ6PEY2 450 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 PAGE2Q7Z2X7 111 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 SRRM1Q8IYB3 904 aaKnown RBP15.04■□□□□ -0
TRIM28-213ENST00000598355 TMEM132CQ8N3T6 1108 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 GBP7Q8N8V2 638 aaPredicted RBP15.04■□□□□ -0
TRIM28-213ENST00000598355 MORN4Q8NDC4 146 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 DAZLQ92904 295 aaKnown RBP15.04■□□□□ -0
TRIM28-213ENST00000598355 NCLNQ969V3 563 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 C19orf60Q96EN9 201 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 HBEGFQ99075 208 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 ACPTQ9BZG2 426 aa15.04■□□□□ -0
TRIM28-213ENST00000598355 ASF1BQ9NVP2 202 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms