RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 NPIPA5E9PKD4 350 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 STX16-NPEPL1H3BU86 382 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 FOXE1O00358 373 aaPredicted RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 SAP18O00422 153 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 PLPP1O14494 284 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 STX16O14662 325 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 PRKNO60260 465 aaPredicted RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 LDB3O75112 727 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 SH3BGRLO75368 114 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 ZNF24P17028 368 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 RAP1GDS1P52306 607 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 SLAMF1Q13291 335 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 CUL3Q13618 768 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 DDX39BQ13838 428 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 ZNF787Q6DD87 383 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 RPTNQ6XPR3 784 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 MYLK4Q86YV6 388 aaPredicted RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 SPPL2CQ8IUH8 684 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 GHDCQ8N2G8 530 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 RNF175Q8N4F7 328 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 WDR20Q8TBZ3 569 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 TANKQ92844 425 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 CCDC120Q96HB5 630 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 MTERF1Q99551 399 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 ZNF358Q9NW07 568 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 NPIPA1Q9UND3 350 aa16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 DIDO1Q9BTC0 2240 aaKnown RBP16.67■□□□□ 0.26
CHMP2A-203ENST00000597209 A0A087WUV0 522 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 C17orf105B2RV13 164 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 SIX3O95343 332 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 CLDN9O95484 217 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 TNNI3P19429 210 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 TLX1P31314 330 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 STT3AP46977 705 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 MEOX1P50221 254 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 RPS13P62277 151 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 ART3Q13508 389 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 RNFT1Q5M7Z0 435 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 MRM1Q6IN84 353 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 GPR180Q86V85 440 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 SULF2Q8IWU5 870 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 PTGR2Q8N8N7 351 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 ZFP62Q8NB50 900 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 OR5L2Q8NGL0 311 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 C16orf52Q8NHV5 167 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 SLC2A12Q8TD20 617 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 DCAKDQ8WVC6 231 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 ITLN2Q8WWU7 325 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 MAGED4Q96JG8 741 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 NTMT1Q9BV86 223 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 SORBS1Q9BX66 1292 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 ZNF717Q9BY31 904 aaPredicted RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 TIMMDC1Q9NPL8 285 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 RNF11Q9Y3C5 154 aa16.66■□□□□ 0.26
CHMP2A-203ENST00000597209 OR7A17O14581 309 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 PROM1O43490 865 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 PEX1O43933 1283 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 FGF17O60258 216 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 OR2J2O76002 312 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 COX7A2P14406 83 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 BSGP35613 385 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 TNFRSF17Q02223 184 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 C3AR1Q16581 482 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 CPSF6Q16630 551 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 C10orf62Q5T681 223 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 MDGA2Q7Z553 956 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 ZNF808Q8N4W9 903 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 ZNF721Q8TF20 911 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 RASL10BQ96S79 203 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 OR8D2Q9GZM6 311 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 TSPAN10Q9H1Z9 355 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 NOL11Q9H8H0 719 aaKnown RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 DDX31Q9H8H2 851 aaKnown RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 RYDENQ9NUL5 291 aaKnown RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 XPR1Q9UBH6 696 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 ENTPD4Q9Y227 616 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 ATG4BQ9Y4P1 393 aa16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 KLF2Q9Y5W3 355 aaPredicted RBP16.65■□□□□ 0.26
CHMP2A-203ENST00000597209 A0A0A6YYD5 115 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 MYOCOSA0A1B0GUC4 107 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 A8MVJ9 347 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 POC1B-GALNT4F8VUJ3 575 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 SMIM24O75264 130 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 SEMA3DO95025 777 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 ABHD2P08910 425 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 BUD31P41223 144 aaPredicted RBP16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 HK2P52789 917 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 RNF4P78317 190 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 CHERPQ8IWX8 916 aaKnown RBP16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 CEP112Q8N8E3 955 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 ZNF321PQ8N8H1 164 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 KIF18AQ8NI77 898 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 ASB15Q8WXK1 588 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 ATP6V1E2Q96A05 226 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 PHF21BQ96EK2 531 aa16.64■□□□□ 0.25
CHMP2A-203ENST00000597209 RBM18Q96H35 190 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms