RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 POLR3HQ9Y535 204 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 FAM227AF5H4B4 570 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MASP2O00187 686 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MYO1DO94832 1006 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 BMP10O95393 424 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 GBAP04062 536 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 IDO1P14902 403 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ATP5A1P25705 553 aaKnown RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MAPK1P28482 360 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 TIA1P31483 386 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 OTX2P32243 289 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 FOLR3P41439 243 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 SSR2P43308 183 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 TSFMP43897 325 aaKnown RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 CDC20Q12834 499 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 AMER2Q8N7J2 671 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 EBPLQ9BY08 206 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 RBCK1Q9BYM8 510 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 BRINP2Q9C0B6 783 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 NMUR2Q9GZQ4 415 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ZNF385DQ9H6B1 395 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 WDR54Q9H977 334 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MKKSQ9NPJ1 570 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 AIG1Q9NVV5 245 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MCM8Q9UJA3 840 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 GPR45Q9Y5Y3 372 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 FCHO1O14526 889 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 PCDH7O60245 1069 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 CCDC22O60826 627 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 ANXA4P09525 319 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-207ENST00000597136 G6PDP11413 515 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 PRPS2P11908 318 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 SDC1P18827 310 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 HIST1H1TP22492 207 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-207ENST00000597136 TACR1P25103 407 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 CERS1P27544 350 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 TPP2P29144 1249 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-207ENST00000597136 XCR1P46094 333 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 GABPB1Q06547 395 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-207ENST00000597136 SSPNQ14714 243 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 GSTA3Q16772 222 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 UGT8Q16880 541 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 DEFB109BQ30KR1 87 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 CCNYL2Q5T2Q4 361 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 CYP20A1Q6UW02 462 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 GPR155Q7Z3F1 870 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 NUDT13Q86X67 352 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 CA13Q8N1Q1 262 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 LIX1Q8N485 282 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 ACOT4Q8N9L9 421 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 TGIF2Q9GZN2 237 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 SAR1AQ9NR31 198 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 BAIAP2L1Q9UHR4 511 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 PADI2Q9Y2J8 665 aa14.12□□□□□ -0.15
TRIM28-207ENST00000597136 COPG1Q9Y678 874 aaKnown RBP14.12□□□□□ -0.15
TRIM28-207ENST00000597136 A0A0A6YYD5 115 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 GNG14A0A1W2PPG7 69 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 CDC123O75794 336 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-207ENST00000597136 DCTN3O75935 186 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 SCELO95171 688 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 RECKO95980 971 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 MTTPP55157 894 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 CRTC2Q53ET0 693 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-207ENST00000597136 FAAH2Q6GMR7 532 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 PPP1R32Q7Z5V6 425 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 ZCCHC7Q8N3Z6 543 aaKnown RBP14.11□□□□□ -0.15
TRIM28-207ENST00000597136 CPSF7Q8N684 471 aaKnown RBP14.11□□□□□ -0.15
TRIM28-207ENST00000597136 EXTL1Q92935 676 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 LRRC37BQ96QE4 947 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 CRB3Q9BUF7 120 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 FAM117AQ9C073 453 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 ROGDIQ9GZN7 287 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 MYLK2Q9H1R3 596 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 COPS7BQ9H9Q2 264 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-207ENST00000597136 SDR39U1Q9NRG7 319 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-207ENST00000597136 LANCL2Q9NS86 450 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 C3orf18Q9UK00 162 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 MKL2Q9ULH7 1088 aa14.11□□□□□ -0.15
TRIM28-207ENST00000597136 CPAMD8Q8IZJ3 1885 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 KALRNO60229 2985 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 A0A088AWK7 358 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 ARHGAP10A1A4S6 786 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 IDSB3KWA1 339 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 TMPRSS11DO60235 418 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 CD63P08962 238 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-207ENST00000597136 MRPL19P49406 292 aaKnown RBP14.1□□□□□ -0.15
TRIM28-207ENST00000597136 ATP4BP51164 291 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 MAPK12P53778 367 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 IRX1P78414 480 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-207ENST00000597136 MC1RQ01726 317 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 ZNF763Q0D2J5 394 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 ATP1A4Q13733 1029 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 SQLEQ14534 574 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 PTGR1Q14914 329 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 RPS6KA2Q15349 733 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 TBR1Q16650 682 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 MRM1Q6IN84 353 aaKnown RBP14.1□□□□□ -0.15
TRIM28-207ENST00000597136 TMEM52Q8NDY8 209 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms