RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 C18orf63Q68DL7 685 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 GPRIN3Q6ZVF9 776 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 TRABD2AQ86V40 505 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 ATCAYQ86WG3 371 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 NUDT13Q86X67 352 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 BEST3Q8N1M1 668 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 ARMC10Q8N2F6 343 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 METTL4Q8N3J2 472 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 GALNT11Q8NCW6 608 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 OR1N1Q8NGS0 311 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 RDH11Q8TC12 318 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 SELENOMQ8WWX9 145 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 SLC29A3Q9BZD2 475 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 C12orf65Q9H3J6 166 aaKnown RBP19.69■□□□□ 0.74
PNKP-209ENST00000596726 RPF2Q9H7B2 306 aaKnown RBP19.69■□□□□ 0.74
PNKP-209ENST00000596726 ASF1BQ9NVP2 202 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 ZNF223Q9UK11 482 aaPredicted RBP19.69■□□□□ 0.74
PNKP-209ENST00000596726 COPG1Q9Y678 874 aaKnown RBP19.69■□□□□ 0.74
PNKP-209ENST00000596726 RELNP78509 3460 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 FLNCQ14315 2725 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 TRAV17A0A0B4J275 112 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 MYOCOSA0A1B0GUC4 107 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 CDK2AP1O14519 115 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 F10P00742 488 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 PKNOX1P55347 436 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 DNAJB13P59910 316 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 IFFO1Q0D2I5 559 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 STX4Q12846 297 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 LCP2Q13094 533 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 CYP20A1Q6UW02 462 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 RPS19BP1Q86WX3 136 aaKnown RBP19.68■□□□□ 0.74
PNKP-209ENST00000596726 TMEM132CQ8N3T6 1108 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 CDYL2Q8N8U2 506 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 C7orf57Q8NEG2 295 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 PTPMT1Q8WUK0 201 aaPredicted RBP19.68■□□□□ 0.74
PNKP-209ENST00000596726 TANKQ92844 425 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 TMEM109Q9BVC6 243 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 CDCP1Q9H5V8 836 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 AHSPQ9NZD4 102 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 ADAM29Q9UKF5 820 aa19.68■□□□□ 0.74
PNKP-209ENST00000596726 ESPL1Q14674 2120 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 A0A1W2PR48 441 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 MANBAO00462 879 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 FGF17O60258 216 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 VPS4BO75351 444 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 CPA3P15088 417 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 TPP2P29144 1249 aaPredicted RBP19.67■□□□□ 0.74
PNKP-209ENST00000596726 TLX1P31314 330 aaPredicted RBP19.67■□□□□ 0.74
PNKP-209ENST00000596726 BUD31P41223 144 aaPredicted RBP19.67■□□□□ 0.74
PNKP-209ENST00000596726 CLCN2P51788 898 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 NAA20P61599 178 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 ID2Q02363 134 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 BIKQ13323 160 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 TCHHL1Q5QJ38 904 aaPredicted RBP19.67■□□□□ 0.74
PNKP-209ENST00000596726 BANPQ8N9N5 519 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 NCLNQ969V3 563 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 VMP1Q96GC9 406 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 MRPL1Q9BYD6 325 aaKnown RBP19.67■□□□□ 0.74
PNKP-209ENST00000596726 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.67■□□□□ 0.74
PNKP-209ENST00000596726 OXSMQ9NWU1 459 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 VPS4AQ9UN37 437 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 SLC12A4Q9UP95 1085 aa19.67■□□□□ 0.74
PNKP-209ENST00000596726 PRKRAO75569 313 aaKnown RBP19.66■□□□□ 0.74
PNKP-209ENST00000596726 ESRRBO95718 433 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 KRT6AP02538 564 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 GBAP04062 536 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 KRT6BP04259 564 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 IFNA16P05015 189 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 ENO1P06733 434 aaKnown RBP19.66■□□□□ 0.74
PNKP-209ENST00000596726 HSD3B1P14060 373 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 HSD3B2P26439 372 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 CD96P40200 585 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 KRT6CP48668 564 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 NAGLUP54802 743 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 MLF1P58340 268 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 GALNT1Q10472 559 aaPredicted RBP19.66■□□□□ 0.74
PNKP-209ENST00000596726 TBL3Q12788 808 aaKnown RBP19.66■□□□□ 0.74
PNKP-209ENST00000596726 TUBA3CQ13748 450 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 TUBA3EQ6PEY2 450 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 CCNYL1Q8N7R7 359 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 MORN4Q8NDC4 146 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 OR14A16Q8NHC5 309 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 METTL6Q8TCB7 284 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 AGAP11Q8TF27 550 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 DAZLQ92904 295 aaKnown RBP19.66■□□□□ 0.74
PNKP-209ENST00000596726 APOPT1Q96IL0 206 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 DEFB126Q9BYW3 111 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 ABI3Q9P2A4 366 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 PLLPQ9Y342 182 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 CLCA3PQ9Y6N3 262 aa19.66■□□□□ 0.74
PNKP-209ENST00000596726 TRBV11-1A0A0K0K1C0 115 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 GABRR3A8MPY1 467 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 TCP11X1B4DZS4 312 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 UBFD1O14562 309 aaKnown RBP19.65■□□□□ 0.74
PNKP-209ENST00000596726 PRAMEF2O60811 474 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 KLK1P06870 262 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 TUBBP07437 444 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 NR2F6P10588 404 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 STT3AP46977 705 aa19.65■□□□□ 0.74
PNKP-209ENST00000596726 FOLH1Q04609 750 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms