RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ZFAND5O76080 213 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 RFPL3SP0C7P2 107 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 CDH1P12830 882 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 HRH2P25021 359 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 HNF4AP41235 474 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 TRPC1P48995 793 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 RGS4P49798 205 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 ZNF136P52737 540 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 PGGT1BP53609 377 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 TBPL1P62380 186 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 MGAT5Q09328 741 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 SP140Q13342 867 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 FAM45BPQ6NSW5 357 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 KIF18BQ86Y91 864 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 LRRC75A-AS1Q8N1F1 130 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 MYO1HQ8N1T3 1032 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 GPATCH11Q8N954 259 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 MFSD9Q8NBP5 474 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 FAM45AQ8TCE6 357 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 LINGO1Q96FE5 620 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 VMP1Q96GC9 406 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 RASL10BQ96S79 203 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 SLC6A15Q9H2J7 730 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 CCDC177Q9NQR7 707 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 MYOTQ9UBF9 498 aa12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 FOXD3Q9UJU5 478 aaPredicted RBP12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 UTP11Q9Y3A2 253 aaKnown RBP12.68□□□□□ -0.38
SHKBP1-208ENST00000595726 ARHGAP21Q5T5U3 1957 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 CTAGE15A4D2H0 777 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 MBD3L4A6NDZ8 208 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 MBD3L5A6NJ08 208 aaPredicted RBP12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 EEF1E1-BLOC1S5C9J1V9 151 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 TGFBR3LH3BV60 316 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 EIF3HO15372 352 aaKnown RBP eCLIP12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 HCN1O60741 890 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 C8GP07360 202 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 CCL3P10147 92 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 NID1P14543 1247 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 PIGAP37287 484 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 RAB8AP61006 207 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 CKAP4Q07065 602 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 HYAL4Q2M3T9 481 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 CATSPEREQ5SY80 951 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 PRSS57Q6UWY2 283 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 CTAGE6Q86UF2 777 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 ZC3HC1Q86WB0 502 aaKnown RBP12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 GPALPP1Q8IXQ4 340 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 CCDC77Q9BR77 488 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 RAB17Q9H0T7 212 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 SAYSD1Q9NPB0 183 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 SMYD2Q9NRG4 433 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 PDE10AQ9Y233 779 aa12.67□□□□□ -0.38
SHKBP1-208ENST00000595726 MYOCOSA0A1B0GUC4 107 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 PSMD12O00232 456 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 CLDN4O14493 209 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 OR1F1O43749 312 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 CNOT4O95628 575 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 EPPINO95925 133 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 SSTR1P30872 391 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 KRTAP1-1Q07627 177 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 PHKG1Q16816 387 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 MBOAT1Q6ZNC8 495 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 RTL4Q6ZR62 310 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 STRA8Q7Z7C7 330 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 C17orf64Q86WR6 236 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 UTP15Q8TED0 518 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 PYROXD1Q8WU10 500 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 MCMBPQ9BTE3 642 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 PHACTR1Q9C0D0 580 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 PARVBQ9HBI1 364 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 NSMCE4AQ9NXX6 385 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 PPIEQ9UNP9 301 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 CHD3Q12873 2000 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-208ENST00000595726 FAM95CA0A1B0GW59 222 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 PIAS1O75925 651 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 URI1O94763 535 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 RNH1P13489 461 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 ZNF37AP17032 561 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 BMP7P18075 431 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 HK2P52789 917 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 PLTPP55058 493 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 IL2P60568 153 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 SORDQ00796 357 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 CAV1Q03135 178 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 TRADDQ15628 312 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 C8orf74Q6P047 294 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 PALM2Q8IXS6 379 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 FBXW8Q8N3Y1 598 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 PIGTQ969N2 578 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 PIP5K1AQ99755 562 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 KLHL31Q9H511 634 aa12.65□□□□□ -0.38
SHKBP1-208ENST00000595726 SACM1LQ9NTJ5 587 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms