RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 METTL2BQ6P1Q9 378 aaKnown RBP21.83■■□□□ 1.09
LSM4-204ENST00000594828 C16orf47Q6ZP98 133 aaPredicted RBP21.83■■□□□ 1.09
LSM4-204ENST00000594828 Q6ZPB1 254 aaPredicted RBP21.83■■□□□ 1.09
LSM4-204ENST00000594828 MDGA2Q7Z553 956 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 GOLGA7Q7Z5G4 137 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 MRGPRGQ86SM5 289 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 CTAGE4Q8IX94 777 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 GHDCQ8N2G8 530 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 ANKRD9Q96BM1 317 aaPredicted RBP21.83■■□□□ 1.09
LSM4-204ENST00000594828 MS4A12Q9NXJ0 267 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 TINAGQ9UJW2 476 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 ERVK-11Q9UQG0 969 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 MYO7BQ6PIF6 2116 aa21.83■■□□□ 1.08
LSM4-204ENST00000594828 PRSS44E7EML9 344 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 H0YIV9 168 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 PEX1O43933 1283 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 SIX3O95343 332 aaPredicted RBP21.82■■□□□ 1.08
LSM4-204ENST00000594828 RBP1P09455 135 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 SERPINB9P50453 376 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 RPS13P62277 151 aaKnown RBP21.82■■□□□ 1.08
LSM4-204ENST00000594828 ART3Q13508 389 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 CPSF6Q16630 551 aaKnown RBP eCLIP21.82■■□□□ 1.08
LSM4-204ENST00000594828 GLE1Q53GS7 698 aaKnown RBP21.82■■□□□ 1.08
LSM4-204ENST00000594828 TECRLQ5HYJ1 363 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 GPR180Q86V85 440 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 GPALPP1Q8IXQ4 340 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 ASB15Q8WXK1 588 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 RPF2Q9H7B2 306 aaKnown RBP21.82■■□□□ 1.08
LSM4-204ENST00000594828 TIMMDC1Q9NPL8 285 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 ZNF358Q9NW07 568 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 ENTPD4Q9Y227 616 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 RNF11Q9Y3C5 154 aa21.82■■□□□ 1.08
LSM4-204ENST00000594828 A8MVJ9 347 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 WWP2O00308 870 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 PLPP1O14494 284 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 KRT38O76015 456 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 ABOP16442 354 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 TLX1P31314 330 aaPredicted RBP21.81■■□□□ 1.08
LSM4-204ENST00000594828 MAGEA12P43365 314 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 ARFIP1P53367 373 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 RPTNQ6XPR3 784 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 TAOK1Q7L7X3 1001 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 OR4N5Q8IXE1 308 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 ZCCHC7Q8N3Z6 543 aaKnown RBP21.81■■□□□ 1.08
LSM4-204ENST00000594828 ZNF808Q8N4W9 903 aaPredicted RBP21.81■■□□□ 1.08
LSM4-204ENST00000594828 ZNF321PQ8N8H1 164 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 PTGR2Q8N8N7 351 aaPredicted RBP21.81■■□□□ 1.08
LSM4-204ENST00000594828 L3MBTL4Q8NA19 623 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 SLC2A12Q8TD20 617 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 SREK1Q8WXA9 508 aaKnown RBP21.81■■□□□ 1.08
LSM4-204ENST00000594828 ATP6V1E2Q96A05 226 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 ISL2Q96A47 359 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 PAFAH2Q99487 392 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 HPF1Q9NWY4 346 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 PHF11Q9UIL8 331 aa21.81■■□□□ 1.08
LSM4-204ENST00000594828 POC1B-GALNT4F8VUJ3 575 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 TFECO14948 347 aaPredicted RBP21.8■■□□□ 1.08
LSM4-204ENST00000594828 FGF17O60258 216 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 CLDN9O95484 217 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 ETHE1O95571 254 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 TUBB4AP04350 444 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 COX7A2P14406 83 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 ECHS1P30084 290 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 RFC3P40938 356 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 GPR85P60893 370 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 RNF4P78317 190 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 HSF1Q00613 529 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 BIKQ13323 160 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 IL20RBQ6UXL0 311 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 OR5L2Q8NGL0 311 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 OR8K3Q8NH51 312 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 C16orf52Q8NHV5 167 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 TANKQ92844 425 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 PHF21BQ96EK2 531 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 RBM18Q96H35 190 aaKnown RBP21.8■■□□□ 1.08
LSM4-204ENST00000594828 SCYL1Q96KG9 808 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 DGAT2Q96PD7 388 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 RASL10BQ96S79 203 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 NOL11Q9H8H0 719 aaKnown RBP21.8■■□□□ 1.08
LSM4-204ENST00000594828 PSD3Q9NYI0 1048 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 COPS7AQ9UBW8 275 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 TMCO1Q9UM00 188 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 ATG4BQ9Y4P1 393 aa21.8■■□□□ 1.08
LSM4-204ENST00000594828 ZNHIT1O43257 154 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 OR6B1O95007 311 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 ARL1P40616 181 aaPredicted RBP21.79■■□□□ 1.08
LSM4-204ENST00000594828 STT3AP46977 705 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 NEK2P51955 445 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 HK2P52789 917 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 IGLV3-21P80748 117 aaPredicted RBP21.79■■□□□ 1.08
LSM4-204ENST00000594828 CUL3Q13618 768 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 TSNAXIP1Q2TAA8 658 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 C18orf63Q68DL7 685 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 BNC2Q6ZN30 1099 aaPredicted RBP21.79■■□□□ 1.08
LSM4-204ENST00000594828 PSD4Q8NDX1 1056 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 WDR20Q8TBZ3 569 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 ZNF721Q8TF20 911 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 KLF2Q9Y5W3 355 aaPredicted RBP21.79■■□□□ 1.08
LSM4-204ENST00000594828 UNC79Q9P2D8 2635 aa21.79■■□□□ 1.08
LSM4-204ENST00000594828 FOXE1O00358 373 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms