RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TXNDC16Q9P2K2 825 aa13.68□□□□□ -0.22
PNKP-202ENST00000593706 MYOTQ9UBF9 498 aa13.68□□□□□ -0.22
PNKP-202ENST00000593706 KCNN3Q9UGI6 736 aa13.68□□□□□ -0.22
PNKP-202ENST00000593706 PPIEQ9UNP9 301 aaKnown RBP13.68□□□□□ -0.22
PNKP-202ENST00000593706 PRRC2AP48634 2157 aaKnown RBP13.68□□□□□ -0.22
PNKP-202ENST00000593706 MPDZO75970 2070 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 A0A0G2JMM0 328 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 A0A1W2PPB8 328 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 A0A1W2PRS3 328 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 PINLYPA6NC86 204 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 LRIT2A6NDA9 550 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 ANKDD1BA6NHY2 528 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 NCF1BA6NI72 391 aaPredicted RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 NCF1CA8MVU1 366 aaPredicted RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 KIR3DP1A8MWS1 328 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 WWP2O00308 870 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 PRAMEF4O60810 478 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 DIAPH2O60879 1101 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 C1GALT1C1LP0DN25 315 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 NCF1P14598 390 aaPredicted RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 ACVR2AP27037 513 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 CERS1P27544 350 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 GSTM2P28161 218 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 GDF5P43026 501 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 KCNC1P48547 511 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 NR0B1P51843 470 aaKnown RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 SLC12A2P55011 1212 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 ATP6V0D1P61421 351 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 RCN2Q14257 317 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 NDUFAF5Q5TEU4 345 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 PRAMEF9Q5VWM5 478 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 ZNF585AQ6P3V2 769 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 SLCO4C1Q6ZQN7 724 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 PDPRQ8NCN5 879 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 OR2L5Q8NG80 312 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 DAZLQ92904 295 aaKnown RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 KIAA1191Q96A73 305 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 RASL10BQ96S79 203 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 REXO4Q9GZR2 422 aaKnown RBP13.67□□□□□ -0.22
PNKP-202ENST00000593706 ZDHHC11Q9H8X9 412 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 SLC24A3Q9HC58 644 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 IGSF5Q9NSI5 407 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 NINJ2Q9NZG7 142 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
PNKP-202ENST00000593706 OR14I1A6ND48 311 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 HOXD4P09016 255 aaPredicted RBP13.66□□□□□ -0.22
PNKP-202ENST00000593706 EPORP19235 508 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 MAGEA5P43359 124 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 GPR143P51810 404 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 HK2P52789 917 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 MTTPP55157 894 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 STX4Q12846 297 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 GXYLT1Q4G148 440 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 XKR6Q5GH73 641 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 B3GNT6Q6ZMB0 384 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 RTL4Q6ZR62 310 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 GPSM1Q86YR5 675 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 CENPLQ8N0S6 344 aaPredicted RBP13.66□□□□□ -0.22
PNKP-202ENST00000593706 OR14A16Q8NHC5 309 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 ZNF592Q92610 1267 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 SERINC2Q96SA4 455 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 CSF3RQ99062 836 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 FAM173AQ9BQD7 235 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 OR8D2Q9GZM6 311 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 ACSS3Q9H6R3 686 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 COPS7AQ9UBW8 275 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 PTBP2Q9UKA9 531 aaKnown RBP13.66□□□□□ -0.22
PNKP-202ENST00000593706 CLDN16Q9Y5I7 305 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
PNKP-202ENST00000593706 MYOCOSA0A1B0GUC4 107 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 TMEM200CA6NKL6 621 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 BCKDKO14874 412 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 CLGNO14967 610 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 CLEC3AO75596 197 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 NADKO95544 446 aaPredicted RBP13.65□□□□□ -0.22
PNKP-202ENST00000593706 TBX6O95947 436 aaPredicted RBP13.65□□□□□ -0.22
PNKP-202ENST00000593706 TNNI3P19429 210 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 LIM2P55344 173 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 TGM3Q08188 693 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 E2F2Q14209 437 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 SLMAPQ14BN4 828 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 ZNF750Q32MQ0 723 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 ISCA2Q86U28 154 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 TCAIMQ8N3R3 496 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 FAM109AQ8N4B1 249 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 MORN4Q8NDC4 146 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 NRGNQ92686 78 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 WDR34Q96EX3 536 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 QRFPRQ96P65 431 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 ATOH8Q96SQ7 321 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 CAPS2Q9BXY5 557 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 EHD1Q9H4M9 534 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 EXO5Q9H790 373 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 WWOXQ9NZC7 414 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
PNKP-202ENST00000593706 DAPP1Q9UN19 280 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms