RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 NPIPA2E9PIF3 369 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 NPIPA3F8WFD2 350 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 G3V3Y1 287 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 CCNT2O60583 730 aaKnown RBP22.15■■□□□ 1.14
LSM4-202ENST00000593564 LDB3O75112 727 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 SCELO95171 688 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 IGHG3P01860 377 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 MSX1P28360 303 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 SSTR1P30872 391 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 PAFAH1B1P43034 410 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 MSH2P43246 934 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 NUP107P57740 925 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 GNG11P61952 73 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 PMPCAQ10713 525 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 CHIT1Q13231 466 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 ZKSCAN8Q15776 578 aaPredicted RBP22.15■■□□□ 1.14
LSM4-202ENST00000593564 TMEM35AQ53FP2 167 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 CYS1Q717R9 158 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 LRRC70Q7Z2Q7 622 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 CCDC71Q8IV32 467 aaPredicted RBP22.15■■□□□ 1.14
LSM4-202ENST00000593564 ACOT4Q8N9L9 421 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 C7orf57Q8NEG2 295 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 KRT12Q99456 494 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 NAPGQ99747 312 aaPredicted RBP22.15■■□□□ 1.14
LSM4-202ENST00000593564 IL1RL2Q9HB29 575 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 RNF112Q9ULX5 631 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 SPACA6W5XKT8 324 aa22.15■■□□□ 1.14
LSM4-202ENST00000593564 BCKDKO14874 412 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 S100BP04271 92 aaPredicted RBP22.14■■□□□ 1.13
LSM4-202ENST00000593564 HIST1H1TP22492 207 aaPredicted RBP22.14■■□□□ 1.13
LSM4-202ENST00000593564 GP5P40197 560 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 RAB10P61026 200 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 OPN5Q6U736 354 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 SPNS3Q6ZMD2 512 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 FAM109AQ8N4B1 249 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 TMEM251Q8N6I4 163 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 OR5M3Q8NGP4 307 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 ZNF721Q8TF20 911 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 UBE2E3Q969T4 207 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 ANKRD9Q96BM1 317 aaPredicted RBP22.14■■□□□ 1.13
LSM4-202ENST00000593564 SMC6Q96SB8 1091 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 CD244Q9BZW8 370 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 PNPLA3Q9NST1 481 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 SACM1LQ9NTJ5 587 aa22.14■■□□□ 1.13
LSM4-202ENST00000593564 A0A1B0GVC2 190 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 TCRBV9S1A1TA0A576 114 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 FIGNL2A6NMB9 653 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 RTCAO00442 366 aaKnown RBP22.13■■□□□ 1.13
LSM4-202ENST00000593564 EIF3HO15372 352 aaKnown RBP eCLIP22.13■■□□□ 1.13
LSM4-202ENST00000593564 ZNF354AO60765 605 aaPredicted RBP22.13■■□□□ 1.13
LSM4-202ENST00000593564 ETHE1O95571 254 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 ACVR2AP27037 513 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 MAGEA5P43359 124 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 ID2Q02363 134 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 MPEG1Q2M385 716 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 HYAL4Q2M3T9 481 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 TRILQ7L0X0 811 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 DMRTC2Q8IXT2 367 aaPredicted RBP22.13■■□□□ 1.13
LSM4-202ENST00000593564 LAS2Q8IYD9 372 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 SAYSD1Q9NPB0 183 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 RNF14Q9UBS8 474 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 COPS7AQ9UBW8 275 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 LIPGQ9Y5X9 500 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 MTORP42345 2549 aa22.13■■□□□ 1.13
LSM4-202ENST00000593564 PHF3Q92576 2039 aaKnown RBP22.13■■□□□ 1.13
LSM4-202ENST00000593564 FAM159BA6NKW6 160 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 C1QAP02745 245 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 COX7A2P14406 83 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 SERPINB1P30740 379 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 IGLV3-21P80748 117 aaPredicted RBP22.12■■□□□ 1.13
LSM4-202ENST00000593564 PCDH1Q08174 1060 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 FOXO1Q12778 655 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 AP5B1Q2VPB7 878 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 MED27Q6P2C8 311 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 FAM47EQ6ZV65 393 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 CHSY3Q70JA7 882 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 OR5M9Q8NGP3 310 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 NUBPLQ8TB37 319 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 EXT2Q93063 718 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 PHACTR1Q9C0D0 580 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 NUDT4Q9NZJ9 180 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 HCFC1P51610 2035 aa22.12■■□□□ 1.13
LSM4-202ENST00000593564 SETD2Q9BYW2 2564 aaPredicted RBP22.11■■□□□ 1.13
LSM4-202ENST00000593564 P04436 131 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 HOXD4P09016 255 aaPredicted RBP22.11■■□□□ 1.13
LSM4-202ENST00000593564 CCL3P10147 92 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 CPN2P22792 545 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 SSR2P43308 183 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 STT3AP46977 705 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 CALCOCO2Q13137 446 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 PIGGQ5H8A4 983 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 STAG3L4Q8TBR4 150 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 UBTD2Q8WUN7 234 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 TTYH2Q9BSA4 534 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 ALG9Q9H6U8 611 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 WHRNQ9P202 907 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 TNFRSF10DQ9UBN6 386 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 KCNN3Q9UGI6 736 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 ATG4BQ9Y4P1 393 aa22.11■■□□□ 1.13
LSM4-202ENST00000593564 AQP7O14520 342 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms