RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PTCD3Q96EY7 689 aaKnown RBP15.12■□□□□ 0.01
LIG1-205ENST00000593425 MS4A8Q9BY19 250 aa15.12■□□□□ 0.01
LIG1-205ENST00000593425 LYRM4Q9HD34 91 aa15.12■□□□□ 0.01
LIG1-205ENST00000593425 SACM1LQ9NTJ5 587 aa15.12■□□□□ 0.01
LIG1-205ENST00000593425 ATG4BQ9Y4P1 393 aa15.12■□□□□ 0.01
LIG1-205ENST00000593425 ARHGAP21Q5T5U3 1957 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 E7ESA3 106 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 PHGDHO43175 533 aaKnown RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 SH3BGRLO75368 114 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 CD1DP15813 335 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 ENDOUP21128 410 aaKnown RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 HPDP32754 393 aaPredicted RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 KCNC1P48547 511 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 MAN2A2P49641 1150 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 SERTAD2Q14140 314 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 PDK4Q16654 411 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 HYAL4Q2M3T9 481 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 ADGRD1Q6QNK2 874 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 OPN5Q6U736 354 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 CAPN12Q6ZSI9 719 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 SYDE1Q6ZW31 735 aaPredicted RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 CLYBLQ8N0X4 340 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 ANKRD9Q96BM1 317 aaPredicted RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 SGCZQ96LD1 299 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 KCNC2Q96PR1 638 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 EFCAB11Q9BUY7 163 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 CNPPD1Q9BV87 410 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 TRIM31Q9BZY9 425 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 CNOT10Q9H9A5 744 aaKnown RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 SPRR3Q9UBC9 169 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 MTO1Q9Y2Z2 717 aaKnown RBP15.11■□□□□ 0.01
LIG1-205ENST00000593425 L3MBTL1Q9Y468 752 aa15.11■□□□□ 0.01
LIG1-205ENST00000593425 FGF17O60258 216 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 STK16O75716 305 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 ZWINTO95229 277 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 P04436 131 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 CCDC166P0CW27 439 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 ATP5A1P25705 553 aaKnown RBP15.1■□□□□ 0.01
LIG1-205ENST00000593425 GMPRP36959 345 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 PIGAP37287 484 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 MSH2P43246 934 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 IST1P53990 364 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 SLC12A2P55011 1212 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 POU4F1Q01851 419 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 TGM3Q08188 693 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 ASPHQ12797 758 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 CHIT1Q13231 466 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 SNTB1Q13884 538 aaKnown RBP15.1■□□□□ 0.01
LIG1-205ENST00000593425 C1orf185Q5T7R7 199 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 SULT1C3Q6IMI6 304 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 DGAT2L6Q6ZPD8 337 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 GPSM1Q86YR5 675 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 OR4N5Q8IXE1 308 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 C9orf40Q8IXQ3 194 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 ACOT4Q8N9L9 421 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 PDPRQ8NCN5 879 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 OR5L2Q8NGL0 311 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 ZNF473Q8WTR7 871 aaKnown RBP15.1■□□□□ 0.01
LIG1-205ENST00000593425 KIAA1191Q96A73 305 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 RUNDC3BQ96NL0 473 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 LDAHQ9H6V9 325 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 NSMCE4AQ9NXX6 385 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 ACAD8Q9UKU7 415 aa15.1■□□□□ 0.01
LIG1-205ENST00000593425 CXorf49A8MYA2 514 aaPredicted RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 HRKO00198 91 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 SUSD5O60279 629 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 CCNT2O60583 730 aaKnown RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 WDR1O75083 606 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 NADKO95544 446 aaPredicted RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 TCP1P17987 556 aaKnown RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 IGLV3-21P80748 117 aaPredicted RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 IRF8Q02556 426 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 LAPTM5Q13571 262 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 SLC10A1Q14973 349 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 MPEG1Q2M385 716 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 PIGGQ5H8A4 983 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 LYPD8Q6UX82 237 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 ZBED8Q8IZ13 594 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 EXT2Q93063 718 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 SARAFQ96BY9 339 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 TBCDQ9BTW9 1192 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 SORBS1Q9BX66 1292 aaKnown RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 ROGDIQ9GZN7 287 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 ZNF703Q9H7S9 590 aaPredicted RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 SH2D2AQ9NP31 389 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 CD274Q9NZQ7 290 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 COPS7AQ9UBW8 275 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 PTBP2Q9UKA9 531 aaKnown RBP15.09■□□□□ 0.01
LIG1-205ENST00000593425 ZFHX3Q15911 3703 aa15.09■□□□□ 0.01
LIG1-205ENST00000593425 TRGV5A0A0B4J1U4 118 aa15.08■□□□□ 0
LIG1-205ENST00000593425 SAP18O00422 153 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 SCELO95171 688 aa15.08■□□□□ 0
LIG1-205ENST00000593425 TGFB1P01137 390 aa15.08■□□□□ 0
LIG1-205ENST00000593425 IGKV3-11P04433 115 aa15.08■□□□□ 0
LIG1-205ENST00000593425 RFPL3SP0C7P2 107 aa15.08■□□□□ 0
LIG1-205ENST00000593425 HIST1H1TP22492 207 aaPredicted RBP15.08■□□□□ 0
LIG1-205ENST00000593425 CPN2P22792 545 aa15.08■□□□□ 0
LIG1-205ENST00000593425 SSTR1P30872 391 aa15.08■□□□□ 0
LIG1-205ENST00000593425 RPL21P46778 160 aaKnown RBP15.08■□□□□ 0
LIG1-205ENST00000593425 STT3AP46977 705 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms