RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 EXO5Q9H790 373 aa16.15■□□□□ 0.18
RETREG3-212ENST00000593251 CCM2LQ9NUG4 571 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-212ENST00000593251 GPRC5BQ9NZH0 403 aa16.15■□□□□ 0.18
RETREG3-212ENST00000593251 SNX12Q9UMY4 172 aa16.15■□□□□ 0.18
RETREG3-212ENST00000593251 L3MBTL1Q9Y468 752 aa16.15■□□□□ 0.18
RETREG3-212ENST00000593251 ATG4BQ9Y4P1 393 aa16.15■□□□□ 0.18
RETREG3-212ENST00000593251 AQP7O14520 342 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 ENDOUP21128 410 aaKnown RBP16.14■□□□□ 0.17
RETREG3-212ENST00000593251 ARL4CP56559 192 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 ASPHQ12797 758 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 RCN2Q14257 317 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 C1orf185Q5T7R7 199 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 OPN5Q6U736 354 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 WDR53Q7Z5U6 358 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-212ENST00000593251 OR4N5Q8IXE1 308 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 KLHL7Q8IXQ5 586 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 GOLM1Q8NBJ4 401 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 FBXO36Q8NEA4 188 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 OR8K3Q8NH51 312 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 DOK4Q8TEW6 326 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 ZNF721Q8TF20 911 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 ANKRD9Q96BM1 317 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-212ENST00000593251 LRRC39Q96DD0 335 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 PTCD3Q96EY7 689 aaKnown RBP16.14■□□□□ 0.17
RETREG3-212ENST00000593251 VPS39Q96JC1 886 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 SGCZQ96LD1 299 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 CAPS2Q9BXY5 557 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 PITHD1Q9GZP4 211 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-212ENST00000593251 EHD1Q9H4M9 534 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 CAB39LQ9H9S4 337 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 PRM3Q9NNZ6 103 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 SPRR3Q9UBC9 169 aa16.14■□□□□ 0.17
RETREG3-212ENST00000593251 NIPBLQ6KC79 2804 aaeCLIP16.14■□□□□ 0.17
RETREG3-212ENST00000593251 SYNDIG1LA6NDD5 238 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SUSD5O60279 629 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 WDR1O75083 606 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 HPDP32754 393 aaPredicted RBP16.13■□□□□ 0.17
RETREG3-212ENST00000593251 KCNC1P48547 511 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SLC12A2P55011 1212 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 TGM3Q08188 693 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 PDIA2Q13087 525 aaKnown RBP16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SERTAD2Q14140 314 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 FRG1Q14331 258 aaKnown RBP16.13■□□□□ 0.17
RETREG3-212ENST00000593251 HYAL4Q2M3T9 481 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 KRTAP21-3Q3LHN1 58 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 WLSQ5T9L3 541 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 ARSKQ6UWY0 536 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 ACOT4Q8N9L9 421 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 OR5L2Q8NGL0 311 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 KIAA1191Q96A73 305 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SARAFQ96BY9 339 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 KCNC2Q96PR1 638 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 POLDIP3Q9BY77 421 aaKnown RBP16.13■□□□□ 0.17
RETREG3-212ENST00000593251 TRIM31Q9BZY9 425 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 DERL2Q9GZP9 239 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 RHOJQ9H4E5 214 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 POPDC3Q9HBV1 291 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SLC24A3Q9HC58 644 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 LYRM4Q9HD34 91 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SMYD2Q9NRG4 433 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 ZNF358Q9NW07 568 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 MOCS1Q9NZB8 636 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 COPS7AQ9UBW8 275 aa16.13■□□□□ 0.17
RETREG3-212ENST00000593251 MTO1Q9Y2Z2 717 aaKnown RBP16.13■□□□□ 0.17
RETREG3-212ENST00000593251 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.13■□□□□ 0.17
RETREG3-212ENST00000593251 TRGV5A0A0B4J1U4 118 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 HRKO00198 91 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 SAP18O00422 153 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 CES2O00748 559 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 PHGDHO43175 533 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 FGF17O60258 216 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 CTAG2O75638 210 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 STK16O75716 305 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 WISP3O95389 354 aaPredicted RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 RFPL3SP0C7P2 107 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 CCDC166P0CW27 439 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 EPORP19235 508 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 ATP5A1P25705 553 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 GGT5P36269 586 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 MSH2P43246 934 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 FOLH1Q04609 750 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 OR4D1Q15615 310 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 PDK4Q16654 411 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 PIGGQ5H8A4 983 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 PRAMEF20Q5VT98 475 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 ADGRD1Q6QNK2 874 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 DGAT2L6Q6ZPD8 337 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 GPSM1Q86YR5 675 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 C9orf40Q8IXQ3 194 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 TCAIMQ8N3R3 496 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 MYRIPQ8NFW9 859 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 EXT2Q93063 718 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 PPWD1Q96BP3 646 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 WDR34Q96EX3 536 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 GPATCH1Q9BRR8 931 aaKnown RBP16.12■□□□□ 0.17
RETREG3-212ENST00000593251 MCMBPQ9BTE3 642 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 EFCAB11Q9BUY7 163 aa16.12■□□□□ 0.17
RETREG3-212ENST00000593251 SORBS1Q9BX66 1292 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 367.2 ms