RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CACNG6Q9BXT2 260 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 GLT8D2Q9H1C3 349 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 TBC1D17Q9HA65 648 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 SYTL2Q9HCH5 934 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 OSER1Q9NX31 292 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 SPASTQ9UBP0 616 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 BAIAP2L1Q9UHR4 511 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 KCNK7Q9Y2U2 307 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 TDRKHQ9Y2W6 561 aaKnown RBP4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CDH23Q9H251 3354 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 COL4A5P29400 1685 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ITGB4P16144 1822 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 FAM230AA0A1W2PPH8 454 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 HYKKA2RU49 373 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ANKUB1A6NFN9 424 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 FAM47DPA6NHR8 397 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ANXA2P2A6NMY6 339 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 HEPACAM2A8MVW5 462 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 PRR32B1ATL7 298 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF879B4DU55 563 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 E9PI62 339 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 MEIS2O14770 477 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CLDN3O15551 220 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 MED24O75448 989 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 TADA2AO75478 443 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CFC1P0CG37 223 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 THRBP10828 461 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 KRT3P12035 628 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ANXA8P13928 327 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 LIFP15018 202 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CHRNA3P32297 505 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CSTF2P33240 577 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 BMI1P35226 326 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 GLIPR1P48060 266 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CDH13P55290 713 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 PMP22Q01453 160 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 PNRC1Q12796 327 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 RBM39Q14498 530 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF273Q14593 569 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ZMYND11Q15326 602 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SNAPC1Q16533 368 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 FASTKD1Q53R41 847 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ANXA8L1Q5VT79 327 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 CLEC2AQ6UVW9 174 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 C6orf89Q6UWU4 347 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 C15orf39Q6ZRI6 1047 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SH2D5Q6ZV89 423 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 KCTD9Q7L273 389 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SYVN1Q86TM6 617 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ISCA2Q86U28 154 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 KLHL7Q8IXQ5 586 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF679Q8IYX0 411 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 PI4KAP1Q8N8J0 262 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 OR5M8Q8NGP6 311 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 EXD1Q8NHP7 514 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 FAM76AQ8TAV0 307 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF671Q8TAW3 534 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 RNF128Q8TEB7 428 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SLAMF9Q96A28 289 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 LRRC39Q96DD0 335 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 MRPL38Q96DV4 380 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 C7orf34Q96L11 122 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SGK494Q96LW2 274 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 PRICKLE1Q96MT3 831 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 MS4A10Q96PG2 267 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SSX3Q99909 188 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 MTG1Q9BT17 334 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 LMF2Q9BU23 707 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 NUP85Q9BW27 656 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 TPPP3Q9BW30 176 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 FAM129AQ9BZQ8 928 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 PNNQ9H307 717 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 GORASP2Q9H8Y8 452 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 KCNK13Q9HB14 408 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 HPS4Q9NQG7 708 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 VPS18Q9P253 973 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 MTRF1LQ9UGC7 380 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 ERRFI1Q9UJM3 462 aaPredicted RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SNX6Q9UNH7 406 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 STX8Q9UNK0 236 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 STK38LQ9Y2H1 464 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 COMMD3-BMI1R4GMX3 469 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 SMG6Q86US8 1419 aaKnown RBP4.45□□□□□ -1.7
SMAD4-216ENST00000593223 KIF26BQ2KJY2 2108 aa4.45□□□□□ -1.7
SMAD4-216ENST00000593223 NRXN2Q9P2S2 1712 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 A0A087WV48 116 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 SLC30A4O14863 429 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 DIAPH2O60879 1101 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 RHOBTB1O94844 696 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 AK1P00568 194 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 MT-ATP6P00846 226 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 TGFAP01135 160 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 KRT14P02533 472 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 IVLP07476 585 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 ZFYP08048 801 aaPredicted RBP4.44□□□□□ -1.7
SMAD4-216ENST00000593223 FOSL2P15408 326 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 PSMA5P28066 241 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 SLC9A3P48764 834 aa4.44□□□□□ -1.7
SMAD4-216ENST00000593223 CCR3P51677 355 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms