RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 DENND6BQ8NEG7 585 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 GIPC3Q8TF64 312 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 MUL1Q969V5 352 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 EXOSC8Q96B26 276 aaKnown RBP18.7■□□□□ 0.58
CLIP3-206ENST00000593074 C17orf62Q9BQA9 187 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 KIR3DX1Q9H7L2 352 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 PCDHGB1Q9Y5G3 927 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 PRAMEF33A0A0G2JMD5 474 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 HAT1O14929 419 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 PPM1DO15297 605 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 XPNPEP2O43895 674 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 PRAMEF10O60809 474 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 SERPIND1P05546 499 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 DRD2P14416 443 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 XCR1P46094 333 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 HYAL2Q12891 473 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 HSPB3Q12988 150 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 MAD2L1BPQ15013 274 aaPredicted RBP18.69■□□□□ 0.58
CLIP3-206ENST00000593074 ENPP7Q6UWV6 458 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 CCDC71Q8IV32 467 aaPredicted RBP18.69■□□□□ 0.58
CLIP3-206ENST00000593074 FAM20CQ8IXL6 584 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 FBXL6Q8N531 539 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 CD93Q9NPY3 652 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 SNX5Q9Y5X3 404 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 A8MVJ9 347 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 KDM1AO60341 852 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 B4GALT2O60909 372 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 CDK4P11802 303 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 ITIH1P19827 911 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 AHRP35869 848 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 PXNP49023 591 aaPredicted RBP18.69■□□□□ 0.58
CLIP3-206ENST00000593074 TPMTP51580 245 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 RPS26P62854 115 aaKnown RBP18.69■□□□□ 0.58
CLIP3-206ENST00000593074 SPIBQ01892 262 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 PIGFQ07326 219 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 LAIR1Q6GTX8 287 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 ZNF605Q86T29 641 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 TRIM69Q86WT6 500 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 SLC38A5Q8WUX1 472 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 HRASLS5Q96KN8 279 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 DPH7Q9BTV6 452 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 RAB23Q9ULC3 237 aa18.69■□□□□ 0.58
CLIP3-206ENST00000593074 A0A0G2JN53 185 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 TCRBV21S2A2A0A5A6 115 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 RECKO95980 971 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 GLULP15104 373 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 ARFIP1P53367 373 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 SLC35A2P78381 396 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 NFATC4Q14934 902 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 NDUFAF5Q5TEU4 345 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 TNFAIP8L2Q6P589 184 aaPredicted RBP18.68■□□□□ 0.58
CLIP3-206ENST00000593074 SMYD1Q8NB12 490 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 OR10G2Q8NGC3 310 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 APOBEC4Q8WW27 367 aaKnown RBP18.68■□□□□ 0.58
CLIP3-206ENST00000593074 OR1E3Q8WZA6 343 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 MS4A6EQ96DS6 147 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 FEVQ99581 238 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 PIP5K1AQ99755 562 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 KLHL31Q9H511 634 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 DUSP21Q9H596 190 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 SPHK1Q9NYA1 384 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 CA5BQ9Y2D0 317 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 SNX11Q9Y5W9 270 aa18.68■□□□□ 0.58
CLIP3-206ENST00000593074 LRRC72A6NJI9 287 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 C4orf51C9J302 202 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 PTGES3LE9PB15 166 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 NOL3O60936 208 aaKnown RBP18.67■□□□□ 0.58
CLIP3-206ENST00000593074 BCHEP06276 602 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 TFPTP0C1Z6 253 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 HOXB3P14651 431 aaPredicted RBP18.67■□□□□ 0.58
CLIP3-206ENST00000593074 FMO3P31513 532 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 LIMS1P48059 325 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 CDH12P55289 794 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 RPP38P78345 283 aaKnown RBP18.67■□□□□ 0.58
CLIP3-206ENST00000593074 PROX2Q3B8N5 592 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 C6orf120Q7Z4R8 191 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 BMFQ96LC9 184 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 PSD2Q9BQI7 771 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 TBC1D29Q9UFV1 150 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 MMP17Q9ULZ9 603 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 TPRKBQ9Y3C4 175 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 ZNF451Q9Y4E5 1061 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 ENPP4Q9Y6X5 453 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 COLEC10Q9Y6Z7 277 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 APBB3O95704 486 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 ANXA8P13928 327 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 POU3F3P20264 500 aaPredicted RBP18.67■□□□□ 0.58
CLIP3-206ENST00000593074 HNRNPA2B1P22626 353 aaKnown RBP18.67■□□□□ 0.58
CLIP3-206ENST00000593074 HTR1BP28222 390 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 HMGA2P52926 109 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 MICAQ29983 383 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 EXOC3L2Q2M3D2 409 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 SPDYE7PQ495Y7 208 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 CYP27C1Q4G0S4 372 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 RD3Q7Z3Z2 195 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 SLC5A8Q8N695 610 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 RAB2BQ8WUD1 216 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 FAM3CQ92520 227 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 UCN3Q969E3 161 aa18.67■□□□□ 0.58
CLIP3-206ENST00000593074 TMEM19Q96HH6 336 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms