RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TMEM211Q6ICI0 200 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 SULT1C3Q6IMI6 304 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 ABHD17CQ6PCB6 329 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 CEP128Q6ZU80 1094 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 FRA10AC1Q70Z53 315 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 CYP4Z2PQ8N1L4 340 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 TMEM132CQ8N3T6 1108 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 C7orf57Q8NEG2 295 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 OR8K3Q8NH51 312 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 KIAA1191Q96A73 305 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 PTCD3Q96EY7 689 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 UBXN10Q96LJ8 280 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 CCDC77Q9BR77 488 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 TMEM79Q9BSE2 394 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 REXO4Q9GZR2 422 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 CNOT10Q9H9A5 744 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 LYRM4Q9HD34 91 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 TIMMDC1Q9NPL8 285 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 PNO1Q9NRX1 252 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 MYOTQ9UBF9 498 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 VTI1BQ9UEU0 232 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 PTBP2Q9UKA9 531 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 FBXW2Q9UKT8 454 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 MRPS33Q9Y291 106 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 TEP1Q99973 2627 aaKnown RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 POC1B-GALNT4F8VUJ3 575 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 TFECO14948 347 aaPredicted RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 CLGNO14967 610 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 HS6ST1O60243 411 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 PRKNO60260 465 aaPredicted RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF500O60304 480 aaPredicted RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 STK16O75716 305 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 CCDC166P0CW27 439 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 STMN1P16949 149 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 PPP2R1BP30154 601 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 SSR4P51571 173 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 PLA2G16P53816 162 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 MTTPP55157 894 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 ATP6V0D1P61421 351 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 POU4F2Q12837 409 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 SLC13A2Q13183 592 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 LAPTM5Q13571 262 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 RCN2Q14257 317 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 GRTP1Q5TC63 336 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 MROH9Q5TGP6 573 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 ARHGAP11AQ6P4F7 1023 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 TRIM40Q6P9F5 258 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 C3P1Q6ZMU1 363 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 RGS9BPQ6ZS82 235 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 NCCRP1Q6ZVX7 275 aaPredicted RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 RAPH1Q70E73 1250 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 CMC1Q7Z7K0 106 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 GPSM1Q86YR5 675 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 PDPRQ8NCN5 879 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 MORN4Q8NDC4 146 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 SRFBP1Q8NEF9 429 aaKnown RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 OR52N2Q8NGI0 321 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 LILRB4Q8NHJ6 448 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 CA5BP1Q8WTZ4 195 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 PTPMT1Q8WUK0 201 aaPredicted RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 DAZLQ92904 295 aaKnown RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 EXT2Q93063 718 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 NCLNQ969V3 563 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 GTPBP3Q969Y2 492 aaKnown RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 TSPAN17Q96FV3 270 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 GPR22Q99680 433 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 EFCAB11Q9BUY7 163 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 L2HGDHQ9H9P8 463 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 DEPPQ9NTK1 212 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 DNAJC11Q9NVH1 559 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 COQ3Q9NZJ6 369 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 PPT2Q9UMR5 302 aa9.66□□□□□ -0.86
VPS4B-207ENST00000591519 V9GYY5 206 aaPredicted RBP9.66□□□□□ -0.86
VPS4B-207ENST00000591519 ADGRG4Q8IZF6 3080 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 TACC2O95359 2948 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 A0A0G2JN53 185 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 NCF1BA6NI72 391 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 NCF1CA8MVU1 366 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 OR2J2O76002 312 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 TPOP07202 933 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 NCF1P14598 390 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 CD1DP15813 335 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 IGFBP2P18065 325 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 EPORP19235 508 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 CD22P20273 847 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 CNR1P21554 472 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 KCNC1P48547 511 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 HSPA7P48741 367 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 TGM3Q08188 693 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 SERTAD2Q14140 314 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 DOC2AQ14183 400 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 ZKSCAN8Q15776 578 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 HIST2H2ACQ16777 129 aaPredicted RBP9.65□□□□□ -0.86
VPS4B-207ENST00000591519 HYAL4Q2M3T9 481 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 EMC4Q5J8M3 183 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 HIST2H2AA3Q6FI13 130 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 PAOXQ6QHF9 649 aa9.65□□□□□ -0.86
VPS4B-207ENST00000591519 HSDL2Q6YN16 418 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms