RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 MORN4Q8NDC4 146 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 OR14A16Q8NHC5 309 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 DAZLQ92904 295 aaKnown RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 RELTQ969Z4 430 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 TSPAN10Q9H1Z9 355 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 LIN28AQ9H9Z2 209 aaKnown RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 C17orf105B2RV13 164 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 RIPK2O43353 540 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 ZG16O60844 167 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 SBK3P0C264 359 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 FAM153BP0C7A2 387 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 RHOXF2BP0C7M4 288 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 ARL1P40616 181 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 ARFIP1P53367 373 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 HNRNPH2P55795 449 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 IGLV3-21P80748 117 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TNFRSF17Q02223 184 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 ALDH6A1Q02252 535 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TRAF3Q13114 568 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 CUL3Q13618 768 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 FAM153CQ494X1 144 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TRMT10CQ7L0Y3 403 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 GPR180Q86V85 440 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 OR4N5Q8IXE1 308 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TMEM151AQ8N4L1 468 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 CPSF7Q8N684 471 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 SREK1Q8WXA9 508 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 ATP6V1E2Q96A05 226 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TMEM125Q96AQ2 219 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TRIM44Q96DX7 344 aaPredicted RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 GPR137Q96N19 417 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 MRPL57Q9BQC6 102 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 RHOXF2Q9BQY4 288 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 OR8D2Q9GZM6 311 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 MRPL46Q9H2W6 279 aaKnown RBP19.15■□□□□ 0.66
CIRBP-226ENST00000590171 MS4A12Q9NXJ0 267 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 ATG4BQ9Y4P1 393 aa19.15■□□□□ 0.66
CIRBP-226ENST00000590171 TRGV8A0A0C4DH27 118 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 FOXE1O00358 373 aaPredicted RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 EEDO75530 441 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 PRKRAO75569 313 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 RPS17P08708 135 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 TNNI3P19429 210 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 COL8A1P27658 744 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 BSGP35613 385 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 SSR4P51571 173 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 CCNG1P51959 295 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 C18orf63Q68DL7 685 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 MRM1Q6IN84 353 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 HSDL2Q6YN16 418 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 RPS27LQ71UM5 84 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 SIAH3Q8IW03 269 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 CYP4Z2PQ8N1L4 340 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 TMEM156Q8N614 296 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 LRRN4CLQ8ND94 238 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 SLC2A12Q8TD20 617 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 NTMT1Q9BV86 223 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 RPF2Q9H7B2 306 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 PSD3Q9NYI0 1048 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 PHF11Q9UIL8 331 aa19.14■□□□□ 0.65
CIRBP-226ENST00000590171 YARS2Q9Y2Z4 477 aaKnown RBP19.14■□□□□ 0.65
CIRBP-226ENST00000590171 SPTBN1Q01082 2364 aaKnown RBP19.13■□□□□ 0.65
CIRBP-226ENST00000590171 A0A0A6YYD5 115 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 A8MT66 165 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 NPIPA5E9PKD4 350 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 TMPRSS11DO60235 418 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 OR2J2O76002 312 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 FOLH1Q04609 750 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 RBPJQ06330 500 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 RNFT1Q5M7Z0 435 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 LGSNQ5TDP6 509 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 ADGRD1Q6QNK2 874 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 TIFABQ6ZNK6 161 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 MDGA2Q7Z553 956 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 MTFMTQ96DP5 389 aaKnown RBP19.13■□□□□ 0.65
CIRBP-226ENST00000590171 TXLNGYQ9BZA5 131 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 DDX31Q9H8H2 851 aaKnown RBP19.13■□□□□ 0.65
CIRBP-226ENST00000590171 SEMA4BQ9NPR2 832 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-226ENST00000590171 MYOTQ9UBF9 498 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 PPT2Q9UMR5 302 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 NPIPA1Q9UND3 350 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 KLF13Q9Y2Y9 288 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-226ENST00000590171 ASB4Q9Y574 426 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 CROCCQ5TZA2 2017 aa19.13■□□□□ 0.65
CIRBP-226ENST00000590171 MAST4O15021 2626 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 NBPF19A0A087WUL8 3843 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 A0A1B0GTL3 188 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 WWP2O00308 870 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 PROM1O43490 865 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 SLC19A2O60779 497 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 MLYCDO95822 493 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 ZNF24P17028 368 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 BUD31P41223 144 aaPredicted RBP19.12■□□□□ 0.65
CIRBP-226ENST00000590171 CA7P43166 264 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 STT3AP46977 705 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 HK2P52789 917 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 KRTCAP3Q53RY4 240 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 FRG2Q64ET8 278 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 DGAT2L6Q6ZPD8 337 aa19.12■□□□□ 0.65
CIRBP-226ENST00000590171 NUDT13Q86X67 352 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms