RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 C2CD4AQ8NCU7 369 aaPredicted RBP13.89□□□□□ -0.19
SF3A2-204ENST00000589118 SLC2A12Q8TD20 617 aa13.89□□□□□ -0.19
SF3A2-204ENST00000589118 RUNDC3BQ96NL0 473 aa13.89□□□□□ -0.19
SF3A2-204ENST00000589118 ZNF703Q9H7S9 590 aaPredicted RBP13.89□□□□□ -0.19
SF3A2-204ENST00000589118 PELI2Q9HAT8 420 aa13.89□□□□□ -0.19
SF3A2-204ENST00000589118 TAS2R13Q9NYV9 303 aa13.89□□□□□ -0.19
SF3A2-204ENST00000589118 MAGEB16A2A368 324 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 LRIT2A6NDA9 550 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 CDC7O00311 574 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 DVL2O14641 736 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 B3GALT2O43825 422 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 HCN1O60741 890 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 GABRA1P14867 456 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 CEACAM8P31997 349 aaPredicted RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 CXCR5P32302 372 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 MAGEA6P43360 314 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 KCNJ2P63252 427 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 SARNPP82979 210 aaKnown RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 ACSF3Q4G176 576 aaPredicted RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 PLXDC2Q6UX71 529 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 LYPD8Q6UX82 237 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 VN1R5Q7Z5H4 357 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 CXorf67Q86X51 503 aaPredicted RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 GOLM1Q8NBJ4 401 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 ZNF721Q8TF20 911 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 MAIP1Q8WWC4 291 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 NANOS1Q8WY41 292 aaKnown RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 GAL3ST3Q96A11 431 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 PPWD1Q96BP3 646 aaKnown RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 WDR83Q9BRX9 315 aaKnown RBP13.88□□□□□ -0.19
SF3A2-204ENST00000589118 VTI1BQ9UEU0 232 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 CSPG4Q6UVK1 2322 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 MED12Q93074 2177 aa13.88□□□□□ -0.19
SF3A2-204ENST00000589118 DOCK7Q96N67 2140 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 C15orf38-AP3S2A0A0A6YYH1 394 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 CLCA1A8K7I4 914 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 INAFM1C9JVW0 142 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 CTNSO60931 367 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 SH3BGRLO75368 114 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 EPPINO95925 133 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 IL2P60568 153 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 STX4Q12846 297 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 DUSP8Q13202 625 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 SLBPQ14493 270 aaKnown RBP eCLIP13.87□□□□□ -0.19
SF3A2-204ENST00000589118 ZNF791Q3KP31 576 aaPredicted RBP13.87□□□□□ -0.19
SF3A2-204ENST00000589118 FBXO48Q5FWF7 155 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 PIGGQ5H8A4 983 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 SLC22A10Q63ZE4 541 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 LRRC8EQ6NSJ5 796 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 OPN5Q6U736 354 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 TMEM64Q6YI46 380 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 ZNF595Q8IYB9 648 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 MORN4Q8NDC4 146 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 NEIL3Q8TAT5 605 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 CALML6Q8TD86 181 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 F2RL3Q96RI0 385 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 YIPF4Q9BSR8 244 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 TRIM54Q9BYV2 358 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 SH2D2AQ9NP31 389 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 SLC6A5Q9Y345 797 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 JRKLQ9Y4A0 524 aa13.87□□□□□ -0.19
SF3A2-204ENST00000589118 FBN1P35555 2871 aaKnown RBP13.87□□□□□ -0.19
SF3A2-204ENST00000589118 TLN2Q9Y4G6 2542 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 PABPN1LA6NDY0 278 aaKnown RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 NPEPPSL1A6NEC2 478 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 EEF1E1-BLOC1S5C9J1V9 151 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 EEF1E1O43324 174 aaKnown RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 PRAMEF4O60810 478 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 ACSL3O95573 720 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 HRGP04196 525 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 C1GALT1C1LP0DN25 315 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 AP1S2P56377 157 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 STXBP1P61764 594 aaKnown RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 PDAP1Q13442 181 aaKnown RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 FBXL19-AS1Q494R0 122 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 Q5PR19 223 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 PRAMEF9Q5VWM5 478 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 SLCO4C1Q6ZQN7 724 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 CXXC5Q7LFL8 322 aaKnown RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 C9orf40Q8IXQ3 194 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 FBXW8Q8N3Y1 598 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 LIX1Q8N485 282 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 GPATCH11Q8N954 259 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 FAM13CQ8NE31 585 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 DAZLQ92904 295 aaKnown RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 SGCZQ96LD1 299 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 TIMP4Q99727 224 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 MAPKAP1Q9BPZ7 522 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 NPLQ9BXD5 320 aaPredicted RBP13.86□□□□□ -0.19
SF3A2-204ENST00000589118 KCNF1Q9H3M0 494 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 ZFP64Q9NPA5 681 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 DAPP1Q9UN19 280 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 COL6A5A8TX70 2615 aa13.86□□□□□ -0.19
SF3A2-204ENST00000589118 TRIM64A6NGJ6 449 aa13.85□□□□□ -0.19
SF3A2-204ENST00000589118 TRIM64BA6NI03 449 aa13.85□□□□□ -0.19
SF3A2-204ENST00000589118 FAM47E-STBD1D6RA91 191 aa13.85□□□□□ -0.19
SF3A2-204ENST00000589118 RTCAO00442 366 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms