RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SHISA5Q8N114 240 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 OR9A4Q8NGU2 314 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 N4BP2L2Q92802 583 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 CSF3RQ99062 836 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 KCTD14Q9BQ13 255 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 NPLQ9BXD5 320 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 ACSS1Q9NUB1 689 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 MS4A12Q9NXJ0 267 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF282Q9UDV7 671 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 PCDHGB4Q9UN71 923 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 HYKKA2RU49 373 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 SGK494L7N484 410 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 CLIC1O00299 241 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 CDX4O14627 284 aaPredicted RBP24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 NVLO15381 856 aaKnown RBP24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 FLRT2O43155 660 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 ABCB1P08183 1280 aaPredicted RBP24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 CPN2P22792 545 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 ERFP50548 548 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 BNIP2Q12982 314 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 NDUFA9Q16795 377 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 PRR23CQ6ZRP0 262 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF551Q7Z340 670 aaPredicted RBP24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 IFNEQ86WN2 208 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 PTRH1Q86Y79 214 aaKnown RBP24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 CA13Q8N1Q1 262 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 ZFP90Q8TF47 636 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 OR5P2Q8WZ92 322 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 CNRIP1Q96F85 164 aaPredicted RBP24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 ECSITQ9BQ95 431 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 AP3M1Q9Y2T2 418 aa24.58■■□□□ 1.53
SCAMP4-210ENST00000588555 TMEM150CB9EJG8 249 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 HTR1EP28566 365 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 GZMMP51124 257 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 EMP3P54852 163 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 TCF15Q12870 199 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 MLC1Q15049 377 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CALHM3Q86XJ0 350 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 OR10A6Q8NH74 314 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 ZBED6CLQ96FA7 236 aaPredicted RBP24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CNDP2Q96KP4 475 aaKnown RBP24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 DPYSL5Q9BPU6 564 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 TPT1P8Q9HAU6 139 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 PRDM9Q9NQV7 894 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 IGHV5-10-1A0A0J9YXX1 117 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 RDH16O75452 317 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CKMT2P17540 419 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 GCGRP47871 477 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 MANFP55145 182 aaKnown RBP24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 OR4D2P58180 307 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 GRM7Q14831 915 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CEBPEQ15744 281 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CLPPQ16740 277 aaPredicted RBP24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 TMTC4Q5T4D3 741 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CLEC4FQ8N1N0 589 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 OR1L3Q8NH93 324 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 JADE3Q92613 823 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 AMDHD1Q96NU7 426 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 PIF1Q9H611 641 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 CXorf36Q9H7Y0 433 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 IRAK4Q9NWZ3 460 aa24.57■■□□□ 1.52
SCAMP4-210ENST00000588555 A0A0A6YYC8 382 aaPredicted RBP24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 MYO1GB0I1T2 1018 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 I3L1I5 382 aaPredicted RBP24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 CYR61O00622 381 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 NSA2O95478 260 aaKnown RBP24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 GPX2P18283 190 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 BHLHE22Q8NFJ8 381 aaPredicted RBP24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 PSMA8Q8TAA3 256 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 ZNF681Q96N22 645 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 GLIPR2Q9H4G4 154 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 RXFP3Q9NSD7 469 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 EGFL7Q9UHF1 273 aa24.56■■□□□ 1.52
SCAMP4-210ENST00000588555 NTN3O00634 580 aaPredicted RBP24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 ERAL1O75616 437 aaKnown RBP24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 OR2B3O76000 313 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 LDOC1O95751 146 aaPredicted RBP24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 DUSP2Q05923 314 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 HIPK4Q8NE63 616 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 PRSS33Q8NF86 280 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 SUN3Q8TAQ9 357 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 ZNF501Q96CX3 271 aaPredicted RBP24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 RPF2Q9H7B2 306 aaKnown RBP24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 NEUROD4Q9HD90 331 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 SIRT3Q9NTG7 399 aaPredicted RBP24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 PCDHB3Q9Y5E6 796 aa24.55■■□□□ 1.52
SCAMP4-210ENST00000588555 A0A1W2PS29 197 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 EVPLLA8MZ36 301 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 KRT36O76013 467 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ACP1P24666 158 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 TLX1P31314 330 aaPredicted RBP24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ZNF750Q32MQ0 723 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 OR52E8Q6IFG1 317 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 NIPAL1Q6NVV3 410 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 TRIML2Q8N7C3 387 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 TTC29Q8NA56 475 aaPredicted RBP24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 RHBDD1Q8TEB9 315 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 MUC13Q9H3R2 512 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 SYNDIG1Q9H7V2 258 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ACTR3BQ9P1U1 418 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms