RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SERPINI1Q99574 410 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 NTMT1Q9BV86 223 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 OR8D2Q9GZM6 311 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 TRIM45Q9H8W5 580 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 SEMA4BQ9NPR2 832 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 LYARQ9NX58 379 aaKnown RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 PSD3Q9NYI0 1048 aa18.22■□□□□ 0.51
TPM4-208ENST00000588410 ZNF223Q9UK11 482 aaPredicted RBP18.22■□□□□ 0.51
TPM4-208ENST00000588410 WIPF3A6NGB9 483 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 NME2P1O60361 137 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 STSP08842 583 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 FAM153BP0C7A2 387 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 NME2P22392 152 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 SSR4P51571 173 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 GPR143P51810 404 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 TNFRSF17Q02223 184 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 IFT88Q13099 833 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 SLC29A2Q14542 456 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 FAM153CQ494X1 144 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 C10orf62Q5T681 223 aaPredicted RBP18.21■□□□□ 0.51
TPM4-208ENST00000588410 C1QL3Q5VWW1 255 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 FRG2Q64ET8 278 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 NUDT13Q86X67 352 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 OR4N5Q8IXE1 308 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 CNPY4Q8N129 248 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 TANKQ92844 425 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 ANKRD9Q96BM1 317 aaPredicted RBP18.21■□□□□ 0.51
TPM4-208ENST00000588410 NSUN5Q96P11 429 aaKnown RBP18.21■□□□□ 0.51
TPM4-208ENST00000588410 DGAT2Q96PD7 388 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 FRG2BQ96QU4 278 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 WDR41Q9HAD4 459 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 PSMC3IPQ9P2W1 217 aaPredicted RBP18.21■□□□□ 0.51
TPM4-208ENST00000588410 COPS7AQ9UBW8 275 aa18.21■□□□□ 0.51
TPM4-208ENST00000588410 YARS2Q9Y2Z4 477 aaKnown RBP18.21■□□□□ 0.51
TPM4-208ENST00000588410 TRGV8A0A0C4DH27 118 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 ASPDHA6ND91 283 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 FGF17O60258 216 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 OTCP00480 354 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 GCAP28676 217 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 TRAF3Q13114 568 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 BIKQ13323 160 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.2■□□□□ 0.54e-6■■■□□ 19.1
TPM4-208ENST00000588410 KRTCAP3Q53RY4 240 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 C18orf63Q68DL7 685 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 LCA5Q86VQ0 697 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 FJX1Q86VR8 437 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 CYP4Z2PQ8N1L4 340 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 SLC2A12Q8TD20 617 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 RBM18Q96H35 190 aaKnown RBP18.2■□□□□ 0.5
TPM4-208ENST00000588410 ELOVL6Q9H5J4 265 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 DDX31Q9H8H2 851 aaKnown RBP18.2■□□□□ 0.5
TPM4-208ENST00000588410 AHSPQ9NZD4 102 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 ERVK-11Q9UQG0 969 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 KLF13Q9Y2Y9 288 aaPredicted RBP18.2■□□□□ 0.5
TPM4-208ENST00000588410 ATG4BQ9Y4P1 393 aa18.2■□□□□ 0.5
TPM4-208ENST00000588410 ESPL1Q14674 2120 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 A8MT66 165 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 NPIPA5E9PKD4 350 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 EEDO75530 441 aaKnown RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 SEMA3DO95025 777 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 ETHE1O95571 254 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 RPS17P08708 135 aaKnown RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 FAM58BPP0C7Q3 252 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 BSGP35613 385 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 STT3AP46977 705 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 CASP6P55212 293 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 HNRNPH2P55795 449 aaKnown RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 PLIN5Q00G26 463 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 SGO1Q5FBB7 561 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 MAMDC2Q7Z304 686 aaPredicted RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 GSPT2Q8IYD1 628 aaKnown RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 OR4F6Q8NGB9 312 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 OR5L2Q8NGL0 311 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 ZNF483Q8TF39 744 aaPredicted RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 SREK1Q8WXA9 508 aaKnown RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 ASB15Q8WXK1 588 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 FRMD6Q96NE9 622 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 TSPAN10Q9H1Z9 355 aaPredicted RBP18.19■□□□□ 0.5
TPM4-208ENST00000588410 ZBTB26Q9HCK0 441 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 TIMMDC1Q9NPL8 285 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 MYOTQ9UBF9 498 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 FETUBQ9UGM5 382 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 PPT2Q9UMR5 302 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 NPIPA1Q9UND3 350 aa18.19■□□□□ 0.5
TPM4-208ENST00000588410 A0A0A6YYD5 115 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 ARHGAP10A1A4S6 786 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 CYSRT1A8MQ03 144 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 A8MVJ9 347 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 KLRC4-KLRK1H3BQV0 150 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 PROM1O43490 865 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 PRKNO60260 465 aaPredicted RBP18.18■□□□□ 0.5
TPM4-208ENST00000588410 OR10H2O60403 315 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 OR2J2O76002 312 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 NR2F6P10588 404 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 ALOX15P16050 662 aaPredicted RBP18.18■□□□□ 0.5
TPM4-208ENST00000588410 ZNF24P17028 368 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 CDH13P55290 713 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 IGLV3-21P80748 117 aaPredicted RBP18.18■□□□□ 0.5
TPM4-208ENST00000588410 FOLH1Q04609 750 aa18.18■□□□□ 0.5
TPM4-208ENST00000588410 GGTA1PQ4G0N0 100 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms