RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 E2F2Q14209 437 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 AP5B1Q2VPB7 878 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 ZNF750Q32MQ0 723 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 TMEM35AQ53FP2 167 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 MROH9Q5TGP6 573 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 CENPLQ8N0S6 344 aaPredicted RBP13.31□□□□□ -0.28
VMP1-206ENST00000587945 TEX9Q8N6V9 391 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 MORN4Q8NDC4 146 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 SRFBP1Q8NEF9 429 aaKnown RBP13.31□□□□□ -0.28
VMP1-206ENST00000587945 OR14A16Q8NHC5 309 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 SLC2A12Q8TD20 617 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 DOK4Q8TEW6 326 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 UBTD2Q8WUN7 234 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 UBE2E3Q969T4 207 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 SDCCAG3Q96C92 435 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 VKORC1Q9BQB6 163 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 ROGDIQ9GZN7 287 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 RAB17Q9H0T7 212 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
VMP1-206ENST00000587945 ABCA12Q86UK0 2595 aa13.31□□□□□ -0.28
VMP1-206ENST00000587945 HMX2A2RU54 273 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 FAM166BA8MTA8 275 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 FGF17O60258 216 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 PRKRAO75569 313 aaKnown RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 SCELO95171 688 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 CPN2P22792 545 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 PTGER4P35408 488 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 ETF1P62495 437 aaKnown RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 RNF4P78317 190 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 PLGLB1Q02325 96 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 GUCY2DQ02846 1103 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 SLAMF1Q13291 335 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 SERTAD2Q14140 314 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 UBAP2Q5T6F2 1119 aaKnown RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 DEPDC1Q5TB30 811 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 KHDRBS2Q5VWX1 349 aaKnown RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 OR4C11Q6IEV9 310 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 CHSY3Q70JA7 882 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 MYLK4Q86YV6 388 aaPredicted RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 GPALPP1Q8IXQ4 340 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 ZNF295-AS1Q8N0V1 137 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 MARVELD2Q8N4S9 558 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 OR2M7Q8NG81 312 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 HUS1BQ8NHY5 278 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 FAM57AQ8TBR7 257 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 PHF10Q8WUB8 498 aaKnown RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 PPWD1Q96BP3 646 aaKnown RBP13.3□□□□□ -0.28
VMP1-206ENST00000587945 SCYL1Q96KG9 808 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 TRIM8Q9BZR9 551 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 ACOT9Q9Y305 439 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 ANGPTL3Q9Y5C1 460 aa13.3□□□□□ -0.28
VMP1-206ENST00000587945 C2P06681 752 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 EPB42P16452 691 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 PPIAP62937 165 aaKnown RBP13.29□□□□□ -0.28
VMP1-206ENST00000587945 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 NAB1Q13506 487 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 UAP1Q16222 522 aaPredicted RBP13.29□□□□□ -0.28
VMP1-206ENST00000587945 PFKFB4Q16877 469 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 GRHL2Q6ISB3 625 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 RPRMLQ8N4K4 120 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 ZNF721Q8TF20 911 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 CMTM7Q96FZ5 175 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 MTERF1Q99551 399 aaKnown RBP13.29□□□□□ -0.28
VMP1-206ENST00000587945 DMRT3Q9NQL9 472 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 SNX15Q9NRS6 342 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 PLSCR2Q9NRY7 297 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 SPACA6W5XKT8 324 aa13.29□□□□□ -0.28
VMP1-206ENST00000587945 PCNX1Q96RV3 2341 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 A0A087X1B8 175 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 SYNDIG1LA6NDD5 238 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 WASHC1A8K0Z3 465 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 HRKO00198 91 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 PLPP1O14494 284 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 GFAPP14136 432 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 RAP1GDS1P52306 607 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 HNRNPH2P55795 449 aaKnown RBP13.28□□□□□ -0.28
VMP1-206ENST00000587945 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
VMP1-206ENST00000587945 ASPHQ12797 758 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 SETDB1Q15047 1291 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 C18orf63Q68DL7 685 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 CA5BP1Q8WTZ4 195 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 RGMAQ96B86 450 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 SENP5Q96HI0 755 aaPredicted RBP13.28□□□□□ -0.28
VMP1-206ENST00000587945 LURAP1Q96LR2 239 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 DGAT2Q96PD7 388 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 TTTY12Q9BZ98 90 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 RPF2Q9H7B2 306 aaKnown RBP13.28□□□□□ -0.28
VMP1-206ENST00000587945 ACTR8Q9H981 624 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 ZDHHC18Q9NUE0 388 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 ATG4BQ9Y4P1 393 aa13.28□□□□□ -0.28
VMP1-206ENST00000587945 A0A096LPK6 155 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 SYCE1LA8MT33 242 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 EEDO75530 441 aaKnown RBP13.27□□□□□ -0.29
VMP1-206ENST00000587945 SIX3O95343 332 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms