RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	ARNT	P27540	789 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	NMBR	P28336	390 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	PHB	P35232	272 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	SOX3	P41225	446 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	CLCN7	P51798	805 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	SESN2	P58004	480 aa	Predicted RBP	13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	CDK16	Q00536	496 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	RGS1	Q08116	209 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	CATSPERE	Q5SY80	951 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	FAM47E	Q6ZV65	393 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	UBE2R2	Q712K3	238 aa	Predicted RBP	13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	ULK2	Q8IYT8	1036 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	TBC1D19	Q8N5T2	526 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	NAT8L	Q8N9F0	302 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	GOLM1	Q8NBJ4	401 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	LRRC39	Q96DD0	335 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	RASL10B	Q96S79	203 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	SACM1L	Q9NTJ5	587 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	KLHL42	Q9P2K6	505 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	MYOT	Q9UBF9	498 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	VPS9D1	Q9Y2B5	631 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	MMACHC	Q9Y4U1	282 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	MXRA5	Q9NR99	2828 aa		13.61	□□□□□ -0.23
RANBP3-208	ENST00000587263	OR1F1	O43749	312 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	PRKN	O60260	465 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SMPD2	O60906	423 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	FAM107A	O95990	144 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	B3GALT4	O96024	378 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	IFNB1	P01574	187 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	HRG	P04196	525 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SHBG	P04278	402 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SERPIND1	P05546	499 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	RPL22	P35268	128 aa	Known RBP	13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	CRADD	P78560	199 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	FOXO1	Q12778	655 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	XKR6	Q5GH73	641 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	PRSS57	Q6UWY2	283 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SEM1	Q6ZVN7	128 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	CCDC25	Q86WR0	208 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	PDIK1L	Q8N165	341 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	NAXE	Q8NCW5	288 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	MCU	Q8NE86	351 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	GIMAP7	Q8NHV1	300 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263		Q96MF0	132 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SLC30A3	Q99726	388 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	PIP5K1A	Q99755	562 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	RHBG	Q9H310	441 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	CENPH	Q9H3R5	247 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	PNO1	Q9NRX1	252 aa	Known RBP	13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SPRR3	Q9UBC9	169 aa		13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.6	□□□□□ -0.23
RANBP3-208	ENST00000587263	GMNC	A6NCL1	334 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	URAD	A6NGE7	173 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	GOLGA8T	H3BQL2	631 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	AP3B1	O00203	1094 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263		P04436	131 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	BMP7	P18075	431 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	ENDOU	P21128	410 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	CEACAM8	P31997	349 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	DNASE1L1	P49184	302 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	CCR8	P51685	355 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	GPR143	P51810	404 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	POU4F3	Q15319	338 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	TRIP13	Q15645	432 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	ZNF750	Q32MQ0	723 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	BBS9	Q3SYG4	887 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	AGTRAP	Q6RW13	159 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	LCTL	Q6UWM7	567 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	CYS1	Q717R9	158 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	STRA8	Q7Z7C7	330 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	VWA5B2	Q8N398	1253 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	LINC01560	Q8TB33	94 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	NT5C	Q8TCD5	201 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	BCAS4	Q8TDM0	211 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	UTP15	Q8TED0	518 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	PIGT	Q969N2	578 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	SGCZ	Q96LD1	299 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	HAUS8	Q9BT25	410 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	SSU72	Q9NP77	194 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	TUBA8	Q9NY65	449 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	BFAR	Q9NZS9	450 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	TRPS1	Q9UHF7	1281 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	ARHGAP21	Q5T5U3	1957 aa		13.59	□□□□□ -0.23
RANBP3-208	ENST00000587263	TRBC2	A0A5B9	178 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	SYNDIG1L	A6NDD5	238 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	WWP2	O00308	870 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	EBAG9	O00559	213 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	IL2RA	P01589	272 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	TIMP3	P35625	211 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	NPY2R	P49146	381 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	HNRNPH2	P55795	449 aa	Known RBP	13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	NAE1	Q13564	534 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	PHKG1	Q16816	387 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	HSDL2	Q6YN16	418 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	CYHR1	Q6ZMK1	362 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	LACC1	Q8IV20	430 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	ABHD11	Q8NFV4	315 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	TNIP2	Q8NFZ5	429 aa		13.58	□□□□□ -0.24
RANBP3-208	ENST00000587263	SMPDL3B	Q92485	455 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms