RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SERINC2Q96SA4 455 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 SMR3AQ99954 134 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 MAPKAP1Q9BPZ7 522 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 REXO4Q9GZR2 422 aaKnown RBP10.96□□□□□ -0.65
BRCA1-225ENST00000586385 SLC6A15Q9H2J7 730 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 NT5DC2Q9H857 520 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 DMRT3Q9NQL9 472 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 SACM1LQ9NTJ5 587 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 CORO1CQ9ULV4 474 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-225ENST00000586385 CBLCQ9ULV8 474 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 OARD1Q9Y530 152 aa10.96□□□□□ -0.65
BRCA1-225ENST00000586385 TRGV5A0A0B4J1U4 118 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 PABPN1LA6NDY0 278 aaKnown RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 A6NNC1 897 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 C17orf105B2RV13 164 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 HRKO00198 91 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 DNALI1O14645 258 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 FAM155BO75949 473 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 IGKV3-11P04433 115 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 GNAZP19086 355 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 ELK3P41970 407 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 MTTPP55157 894 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 PPP2R2AP63151 447 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 IGLV3-21P80748 117 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 ASPHQ12797 758 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 MPEG1Q2M385 716 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 WLSQ5T9L3 541 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 OPN5Q6U736 354 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 PAMR1Q6UXH9 720 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 ZC3HC1Q86WB0 502 aaKnown RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 LRRC25Q8N386 305 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 WFDC11Q8NEX6 87 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 TTLQ8NG68 377 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 PAQR8Q8TEZ7 354 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 SARAFQ96BY9 339 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 RMND5BQ96G75 393 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 CAPZA3Q96KX2 299 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 EGFL8Q99944 293 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 MCMBPQ9BTE3 642 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 ALKBH4Q9NXW9 302 aa10.95□□□□□ -0.66
BRCA1-225ENST00000586385 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.95□□□□□ -0.66
BRCA1-225ENST00000586385 EML6Q6ZMW3 1958 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 RTCAO00442 366 aaKnown RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 TP73O15350 636 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 FGF17O60258 216 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 ATE1O95260 518 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 FOSL1P15407 271 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 DNASE1P24855 282 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 GSTM2P28161 218 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 UQCRC1P31930 480 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 CEACAM8P31997 349 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 FNTAP49354 379 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 HNMTP50135 292 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 EFTUD2Q15029 972 aaKnown RBP eCLIP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 DAZAP2Q15038 168 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 FBXL19-AS1Q494R0 122 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 FLYWCH1Q4VC44 716 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 PRAMEF20Q5VT98 475 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 TRIM40Q6P9F5 258 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 OR4N5Q8IXE1 308 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 TNIP2Q8NFZ5 429 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 DOK4Q8TEW6 326 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 ESAMQ96AP7 390 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 WDR34Q96EX3 536 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 CFAP36Q96G28 342 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 SENP5Q96HI0 755 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 PBKQ96KB5 322 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 NAT9Q9BTE0 207 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 EHD1Q9H4M9 534 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 LDAHQ9H6V9 325 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 LYRM4Q9HD34 91 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 CHMP2BQ9UQN3 213 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 MRPS33Q9Y291 106 aaKnown RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 CHCHD2Q9Y6H1 151 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 TEX264Q9Y6I9 313 aa10.94□□□□□ -0.66
BRCA1-225ENST00000586385 FN1P02751 2386 aaKnown RBP10.94□□□□□ -0.66
BRCA1-225ENST00000586385 A0A1B0GTL3 188 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 FAM95CA0A1B0GW59 222 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 A0A1W2PPR1 153 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NCF1BA6NI72 391 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NCF1CA8MVU1 366 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 PGRMC1O00264 195 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 H2AFYO75367 372 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 LRATO95237 230 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 P04436 131 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NCF1P14598 390 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 GABRA1P14867 456 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 ATP5A1P25705 553 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 GGT5P36269 586 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 STX4Q12846 297 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 DOC2AQ14183 400 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 TGFBIQ15582 683 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 ACSF3Q4G176 576 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 Q71RC1 249 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 ADAMTSL2Q86TH1 951 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 KRT78Q8N1N4 520 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 SPATA6LQ8N4H0 392 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 NKAPQ8N5F7 415 aaKnown RBP10.93□□□□□ -0.66
BRCA1-225ENST00000586385 ACOT4Q8N9L9 421 aa10.93□□□□□ -0.66
BRCA1-225ENST00000586385 OR10G3Q8NGC4 313 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms