RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DOC2AQ14183 400 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 TERF2Q15554 542 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 ELAVL1Q15717 326 aaKnown RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 ADPRMQ3LIE5 342 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 PAOXQ6QHF9 649 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 HSDL2Q6YN16 418 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 ZNF595Q8IYB9 648 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 PDIK1LQ8N165 341 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 TMEM132CQ8N3T6 1108 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 RNF175Q8N4F7 328 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 NKAPQ8N5F7 415 aaKnown RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 OR2L5Q8NG80 312 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 GABPB2Q8TAK5 448 aaPredicted RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 ZNF721Q8TF20 911 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 ANKRD9Q96BM1 317 aaPredicted RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 LRRC39Q96DD0 335 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 NAT9Q9BTE0 207 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 TRIM31Q9BZY9 425 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 PHACTR1Q9C0D0 580 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 REXO4Q9GZR2 422 aaKnown RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 DPH5Q9H2P9 285 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 NT5DC2Q9H857 520 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CAB39LQ9H9S4 337 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CCM2LQ9NUG4 571 aaPredicted RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 SPRR3Q9UBC9 169 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 VTI1BQ9UEU0 232 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CORO1CQ9ULV4 474 aaPredicted RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 MTO1Q9Y2Z2 717 aaKnown RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 L3MBTL1Q9Y468 752 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CLCA3PQ9Y6N3 262 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 A0A1B0GVC2 190 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ANKDD1BA6NHY2 528 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 FOXO6A8MYZ6 492 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 C17orf105B2RV13 164 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 EIF3HO15372 352 aaKnown RBP eCLIP10.74□□□□□ -0.69
LIG3-207ENST00000586119 CLEC3AO75596 197 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 LRATO95237 230 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 WISP3O95389 354 aaPredicted RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 IGHG3P01860 377 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 CD1EP15812 388 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 EPORP19235 508 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ZFP36L2P47974 494 aaKnown RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 KCNC1P48547 511 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ARL4CP56559 192 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 WNT3P56703 355 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 MRPS25P82663 173 aaKnown RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 SLC7A5Q01650 507 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 GUCY2DQ02846 1103 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 MGAT5Q09328 741 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ASPHQ12797 758 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 STX4Q12846 297 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 TGFBIQ15582 683 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 OR4D1Q15615 310 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 CES4AQ5XG92 561 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ADGRD1Q6QNK2 874 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 RTL4Q6ZR62 310 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 FAM47EQ6ZV65 393 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ACAD11Q709F0 780 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 SLC22A16Q86VW1 577 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 IFT20Q8IY31 132 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ZZZ3Q8IYH5 903 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 FAM109AQ8N4B1 249 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 EIF1ADQ8N9N8 165 aaKnown RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 MORN4Q8NDC4 146 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 SLC2A12Q8TD20 617 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 PPWD1Q96BP3 646 aaKnown RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 SERINC2Q96SA4 455 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 FAM173AQ9BQD7 235 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 SORBS1Q9BX66 1292 aaKnown RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 TSPYL1Q9H0U9 437 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 GSX1Q9H4S2 264 aaPredicted RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 IL1RL2Q9HB29 575 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 PROK2Q9HC23 129 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 DNAJB12Q9NXW2 375 aaKnown RBP10.74□□□□□ -0.69
LIG3-207ENST00000586119 GRHL1Q9NZI5 618 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 KCNN3Q9UGI6 736 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 ATG4BQ9Y4P1 393 aa10.74□□□□□ -0.69
LIG3-207ENST00000586119 MAP1AP78559 2803 aaPredicted RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 CXorf49A8MYA2 514 aaPredicted RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 ACOT7O00154 380 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 SAP18O00422 153 aaKnown RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 CLGNO14967 610 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 PHGDHO43175 533 aaKnown RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 PRKRAO75569 313 aaKnown RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 CD99P14209 185 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 HOXB4P17483 251 aaPredicted RBP10.73□□□□□ -0.69
LIG3-207ENST00000586119 HNMTP50135 292 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 MTTPP55157 894 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 SLC10A1Q14973 349 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 PIGGQ5H8A4 983 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 TRIM40Q6P9F5 258 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 LYPD8Q6UX82 237 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 B3GNT6Q6ZMB0 384 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 FRA10AC1Q70Z53 315 aa10.73□□□□□ -0.69
LIG3-207ENST00000586119 GPALPP1Q8IXQ4 340 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms