RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-215ENST00000584944 TNFRSF12AQ9NP84 129 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 GIMAP4Q9NUV9 329 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 TMED5Q9Y3A6 229 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 MMACHCQ9Y4U1 282 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 PTGDR2Q9Y5Y4 395 aa13.05□□□□□ -0.32
TRAF4-215ENST00000584944 TLN1Q9Y490 2541 aaKnown RBP13.05□□□□□ -0.32
TRAF4-215ENST00000584944 NSG1A0A0A6YYJ2 146 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 ATP6AP2A0A1C7CYW4 349 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 HDAC3O15379 428 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 OR10H2O60403 315 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 CNOT3O75175 753 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 PEX11AO75192 247 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 SNNO75324 88 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 ATP6AP2O75787 350 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 ITGB2P05107 769 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 UMODP07911 640 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 DDX5P17844 614 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 TNNI3P19429 210 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 MAOAP21397 527 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 PIK3R1P27986 724 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 FOXL2P58012 376 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 TAS2R50P59544 299 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 TRA2BP62995 288 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 SNRPNP63162 240 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 EEF1A2Q05639 463 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 ZNF763Q0D2J5 394 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 ATP1A1-AS1Q5TC04 95 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 NDUFAF5Q5TEU4 345 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 NXNQ6DKJ4 435 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 OR52E8Q6IFG1 317 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 QSOX2Q6ZRP7 698 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 FAM47EQ6ZV65 393 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 FNDC5Q8NAU1 212 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 APOBEC4Q8WW27 367 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 CKAP2Q8WWK9 683 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 APIPQ96GX9 242 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 SORT1Q99523 831 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 NUF2Q9BZD4 464 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 PNO1Q9NRX1 252 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 PNPOQ9NVS9 261 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 P4HTMQ9NXG6 502 aa13.04□□□□□ -0.32
TRAF4-215ENST00000584944 EIF3LQ9Y262 564 aaKnown RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 POLR3HQ9Y535 204 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-215ENST00000584944 SCN3AQ9NY46 2000 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 GLOD5A6NK44 160 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 PYCARD-AS1I3L0S3 204 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 PROM1O43490 865 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 SLC28A2O43868 658 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 TMPRSS11DO60235 418 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 CTNSO60931 367 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 DNAJB6O75190 326 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 ICAM2P13598 275 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 TPP2P29144 1249 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-215ENST00000584944 ARRB2P32121 409 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 HNRNPH2P55795 449 aaKnown RBP13.03□□□□□ -0.32
TRAF4-215ENST00000584944 SERTAD2Q14140 314 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 NOXRED1Q6NXP6 359 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 BORAQ6PGQ7 559 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 RNF165Q6ZSG1 346 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 MED25Q71SY5 747 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 CPEB2Q7Z5Q1 589 aaKnown RBP13.03□□□□□ -0.32
TRAF4-215ENST00000584944 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 TMEM102Q8N9M5 508 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-215ENST00000584944 PIWIL2Q8TC59 973 aaKnown RBP13.03□□□□□ -0.32
TRAF4-215ENST00000584944 EXTL1Q92935 676 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 RBM18Q96H35 190 aaKnown RBP13.03□□□□□ -0.32
TRAF4-215ENST00000584944 C7orf26Q96N11 449 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 CSF3RQ99062 836 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 LPAR4Q99677 370 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 LANCL2Q9NS86 450 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 ATG4BQ9Y4P1 393 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 CLCA3PQ9Y6N3 262 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
TRAF4-215ENST00000584944 A0A1W2PR48 441 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 C1orf226A1L170 272 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 OR2W5A6NFC9 320 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 CYR61O00622 381 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 KLHL41O60662 606 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 AIFM1O95831 613 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 VIMP08670 466 aaKnown RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 DRD2P14416 443 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 WT1P19544 449 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-215ENST00000584944 ASMTP46597 345 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 BTG2P78543 158 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 PLIN5Q00G26 463 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 OCRLQ01968 901 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 RHAGQ02094 409 aa13.02□□□□□ -0.33
TRAF4-215ENST00000584944 BIKQ13323 160 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms