RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-226	ENST00000583182	PRAMEF4	O60810	478 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	LDB3	O75112	727 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ETHE1	O95571	254 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	RFPL3S	P0C7P2	107 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	GABRA1	P14867	456 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TNNI3	P19429	210 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ZNF10	P21506	573 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	DGKQ	P52824	942 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ID2	Q02363	134 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ASPH	Q12797	758 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	STX4	Q12846	297 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	FLYWCH1	Q4VC44	716 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PRAMEF9	Q5VWM5	478 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TRIM40	Q6P9F5	258 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PAMR1	Q6UXH9	720 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NAXE	Q8NCW5	288 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	OR5L2	Q8NGL0	311 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ZNF721	Q8TF20	911 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	MBD6	Q96DN6	1003 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NT5DC2	Q9H857	520 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	SH2D2A	Q9NP31	389 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PRDM7	Q9NQW5	492 aa		13.63	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ANKDD1B	A6NHY2	528 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	KDM4E	B2RXH2	506 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	FAM47E-STBD1	D6RA91	191 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	GSTM2	P28161	218 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PEX19	P40855	299 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	HNMT	P50135	292 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	WNT3	P56703	355 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	7e-16	■□□□□ 10
CDK5RAP3-226	ENST00000583182	MPEG1	Q2M385	716 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ZNF791	Q3KP31	576 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PIGG	Q5H8A4	983 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	LYPD8	Q6UX82	237 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ZNF793	Q6ZN11	406 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ULK2	Q8IYT8	1036 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	KRT78	Q8N1N4	520 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	WFDC11	Q8NEX6	87 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	FAM222B	Q8WU58	562 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ANKRD49	Q8WVL7	239 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ANKRD7	Q92527	254 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	RHBDF1	Q96CC6	855 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	F2RL3	Q96RI0	385 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	SMR3A	Q99954	134 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	MAPKAP1	Q9BPZ7	522 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NAT9	Q9BTE0	207 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	SLC6A15	Q9H2J7	730 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PROK2	Q9HC23	129 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ZNF490	Q9ULM2	529 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PSAT1	Q9Y617	370 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	KIAA1549	Q9HCM3	1950 aa		13.62	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182		A0A1B0GTL3	188 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	LRRC3C	A6NJW4	275 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	HSPB2	A8KAH6	182 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	DNALI1	O14645	258 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	BMP5	P22003	454 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ASCL1	P50553	236 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	LTB	Q06643	244 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	SERTAD2	Q14140	314 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	RCN2	Q14257	317 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TSN	Q15631	228 aa	Known RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	HSPB2	Q16082	182 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	FBXL19-AS1	Q494R0	122 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PRAMEF20	Q5VT98	475 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	SLC22A10	Q63ZE4	541 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	POMZP3	Q6PJE2	187 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182		Q71RC1	249 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	CAMKMT	Q7Z624	323 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	UBE3D	Q7Z6J8	389 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	C9orf40	Q8IXQ3	194 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	LRRC25	Q8N386	305 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NKAP	Q8N5F7	415 aa	Known RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TNIP2	Q8NFZ5	429 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PAQR8	Q8TEZ7	354 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	RNASE6	Q93091	150 aa	Known RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	CFAP36	Q96G28	342 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	CAPZA3	Q96KX2	299 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	RUNDC3B	Q96NL0	473 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	WDR83	Q9BRX9	315 aa	Known RBP	13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	EDAR	Q9UNE0	448 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	PCDHGB3	Q9Y5G1	929 aa		13.61	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NCF1B	A6NI72	391 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NCF1C	A8MVU1	366 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TAPBP	O15533	448 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ATE1	O95260	518 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	RAF1	P04049	648 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	NCF1	P14598	390 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	CD22	P20273	847 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TACR1	P25103	407 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	CEACAM8	P31997	349 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	ELK3	P41970	407 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TRPC1	P48995	793 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	TAS2R39	P59534	338 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	KCNJ2	P63252	427 aa		13.6	□□□□□ -0.23
CDK5RAP3-226	ENST00000583182	DAZAP2	Q15038	168 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms