RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CD99L2Q8TCZ2 262 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 RAD54LQ92698 747 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 ANKRD27Q96NW4 1050 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 NAA11Q9BSU3 229 aaPredicted RBP2.91□□□□□ -1.94
COPS3-217ENST00000583160 NACAP1Q9BZK3 213 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 ANKRD2Q9GZV1 360 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 TMX4Q9H1E5 349 aaPredicted RBP2.91□□□□□ -1.94
COPS3-217ENST00000583160 ST6GALNAC4Q9H4F1 302 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 DHRS4-AS1Q9P1J3 65 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 C5AR2Q9P296 337 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 MGAT4AQ9UM21 535 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 SNX7Q9UNH6 387 aa2.91□□□□□ -1.94
COPS3-217ENST00000583160 NIP7Q9Y221 180 aaKnown RBP eCLIP2.91□□□□□ -1.94
COPS3-217ENST00000583160 PHLPP1O60346 1717 aa2.9□□□□□ -1.94
COPS3-217ENST00000583160 SPHKAPQ2M3C7 1700 aa2.9□□□□□ -1.94
COPS3-217ENST00000583160 MSH6P52701 1360 aa2.9□□□□□ -1.94
COPS3-217ENST00000583160 TRPM2O94759 1503 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 TEX48A0A1B0GUV7 120 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 LOC390937A0A1W2PQ73 354 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 FBP2O00757 339 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 KBTBD11O94819 623 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 MOCS2O96007 188 aaPredicted RBP2.9□□□□□ -1.95
COPS3-217ENST00000583160 UMPSP11172 480 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 PEX3P56589 373 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 IGLV3-21P80748 117 aaPredicted RBP2.9□□□□□ -1.95
COPS3-217ENST00000583160 RBBP4Q09028 425 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 CNTN1Q12860 1018 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 ZNF273Q14593 569 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 C6orf136Q5SQH8 315 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 CHST3Q7LGC8 479 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 ABI3BPQ7Z7G0 1075 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 OR6T1Q8NGN1 323 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 PCNPQ8WW12 178 aaKnown RBP2.9□□□□□ -1.95
COPS3-217ENST00000583160 RCHY1Q96PM5 261 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 TEX13BQ9BXU2 312 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 FAM129AQ9BZQ8 928 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 UBQLN3Q9H347 655 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 RAB9BQ9NP90 201 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 UBQLN2Q9UHD9 624 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 SLC6A5Q9Y345 797 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 CPQQ9Y646 472 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 RIMS2Q9UQ26 1411 aa2.9□□□□□ -1.95
COPS3-217ENST00000583160 COL22A1Q8NFW1 1626 aaPredicted RBP2.9□□□□□ -1.95
COPS3-217ENST00000583160 KIF1BO60333 1816 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 BCLAF3A2AJT9 711 aaKnown RBP2.89□□□□□ -1.95
COPS3-217ENST00000583160 SRRM4A7MD48 611 aaKnown RBP2.89□□□□□ -1.95
COPS3-217ENST00000583160 ZNF732B4DXR9 585 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 ANHXE9PGG2 379 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 FLRT2O43155 660 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 SRPX2O60687 465 aaPredicted RBP2.89□□□□□ -1.95
COPS3-217ENST00000583160 TBX10O75333 385 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 ZNF253O75346 499 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 DNTTP04053 509 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 SUPT20HL2P0C7V6 817 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 CHRNA3P32297 505 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 BACE1P56817 501 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 CAMK2DQ13557 499 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 PTCH1Q13635 1447 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 FASTKQ14296 549 aaKnown RBP2.89□□□□□ -1.95
COPS3-217ENST00000583160 LTB4RQ15722 352 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 HYAL4Q2M3T9 481 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 SLC22A6Q4U2R8 563 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 TCP11X2Q5H9J9 407 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 KRBOX4Q5JUW0 171 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 SLC27A4Q6P1M0 643 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 RFPL4BQ6ZWI9 263 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
COPS3-217ENST00000583160 RAPH1Q70E73 1250 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 TBC1D10CQ8IV04 446 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 NME8Q8N427 588 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 CARNMT1Q8N4J0 409 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 NCOA7Q8NI08 942 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 LIPHQ8WWY8 451 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 PTPRUQ92729 1446 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 TSSK2Q96PF2 358 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 HSD17B14Q9BPX1 270 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 ANKEF1Q9NU02 776 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 RRBP1Q9P2E9 1410 aaKnown RBP2.89□□□□□ -1.95
COPS3-217ENST00000583160 FAM205AQ6ZU69 1335 aa2.89□□□□□ -1.95
COPS3-217ENST00000583160 NEXMIFQ5QGS0 1516 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 TECPR2O15040 1411 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 ADGRL3Q9HAR2 1447 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 PPLO60437 1756 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 A8MXE2 369 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 FAM220BPB1ANY3 271 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 P4HA2O15460 535 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 PPIP5K2O43314 1243 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 PGLSO95336 258 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 GIG44P09565 113 aaPredicted RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 SP9P0CG40 484 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 DLATP10515 647 aaKnown RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 ATP6V1B1P15313 513 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 PSMB4P28070 264 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 EEF1DP29692 281 aaKnown RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 SLC1A3P43003 542 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 RPS27AP62979 156 aaKnown RBP2.88□□□□□ -1.95
COPS3-217ENST00000583160 NAAAQ02083 359 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 ZNF79Q15937 498 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 CCL14Q16627 93 aa2.88□□□□□ -1.95
COPS3-217ENST00000583160 VWA2Q5GFL6 755 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms