RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 DNAJB14Q8TBM8 379 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 STT3BQ8TCJ2 826 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 MARK4Q96L34 752 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 CSF3RQ99062 836 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 DPY30Q9C005 99 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 MYLK2Q9H1R3 596 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 CLMPQ9H6B4 373 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 RPF2Q9H7B2 306 aaKnown RBP10.84□□□□□ -0.67
GGA3-211ENST00000582232 NXT1Q9UKK6 140 aaKnown RBP10.84□□□□□ -0.67
GGA3-211ENST00000582232 MMACHCQ9Y4U1 282 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 AK5Q9Y6K8 562 aa10.84□□□□□ -0.67
GGA3-211ENST00000582232 GABRR3A8MPY1 467 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 C21orf140B9A014 251 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 FAM227AF5H4B4 570 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CLDN4O14493 209 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 TERTO14746 1132 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 SCAMP2O15127 329 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 PGRMC2O15173 223 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 RAD1O60671 282 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CTNSO60931 367 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CNOT3O75175 753 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 SLC22A3O75751 556 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 DCTN3O75935 186 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 ZGLP1P0C6A0 271 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 PPP2R1BP30154 601 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 ZFP36L2P47974 494 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 HNRNPFP52597 415 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 UFM1P61960 85 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 IGLV3-21P80748 117 aaPredicted RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 MC1RQ01726 317 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 SRSF11Q05519 484 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 NCF4Q15080 339 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CEBPEQ15744 281 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 UGT8Q16880 541 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 TBC1D25Q3MII6 688 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 VWA2Q5GFL6 755 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 OR52E8Q6IFG1 317 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 FAM199XQ6PEV8 388 aaPredicted RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 ERMP1Q7Z2K6 904 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 MTDHQ86UE4 582 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 SCUBE1Q8IWY4 988 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CACNA2D3Q8IZS8 1091 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 KRTCAP2Q8N6L1 136 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 NATD1Q8N6N6 113 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 FAM47BQ8NA70 645 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 TMEM52Q8NDY8 209 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 PLPP5Q8NEB5 264 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 OR8J2Q8NGG1 315 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CLHC1Q8NHS4 586 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 NKD1Q969G9 470 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 MIEF2Q96C03 454 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 COQ8BQ96D53 544 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 TEX37Q96LM6 180 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 SPSB2Q99619 263 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 PRPF18Q99633 342 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 GPR87Q9BY21 358 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 NMUR2Q9GZQ4 415 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 DKK4Q9UBT3 224 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 CTSFQ9UBX1 484 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 GPN3Q9UHW5 284 aaPredicted RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 PSME2Q9UL46 239 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 G3BP2Q9UN86 482 aaKnown RBP10.83□□□□□ -0.68
GGA3-211ENST00000582232 PCDHGA6Q9Y5G7 932 aa10.83□□□□□ -0.68
GGA3-211ENST00000582232 ASPMQ8IZT6 3477 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 IGKV3D-11A0A0A0MRZ8 115 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 DYTNA2CJ06 578 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 FAM234BA2RU67 622 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 FCHO1O14526 889 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 PCDH17O14917 1159 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 AKAP10O43572 662 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 KLF7O75840 302 aaPredicted RBP10.82□□□□□ -0.68
GGA3-211ENST00000582232 LRATO95237 230 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 GPR75O95800 540 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 RECKO95980 971 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 LIPCP11150 499 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 TCN2P20062 427 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 SPINK2P20155 84 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 IL12AP29459 219 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 FRKP42685 505 aaPredicted RBP10.82□□□□□ -0.68
GGA3-211ENST00000582232 RHAGQ02094 409 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 ACTN3Q08043 901 aaPredicted RBP10.82□□□□□ -0.68
GGA3-211ENST00000582232 RCAN2Q14206 197 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 ERV3-1Q14264 604 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 MLIPQ5VWP3 458 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 FAM91A1Q658Y4 838 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 PAOXQ6QHF9 649 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 BLOC1S3Q6QNY0 202 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 RIPOR1Q6ZS17 1223 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 TICAM1Q8IUC6 712 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 FUNDC1Q8IVP5 155 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 SAMD14Q8IZD0 417 aaPredicted RBP10.82□□□□□ -0.68
GGA3-211ENST00000582232 MMP21Q8N119 569 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 CDC26Q8NHZ8 85 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 TSPEARQ8WU66 669 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 CT55Q8WUE5 264 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 GFM2Q969S9 779 aaKnown RBP10.82□□□□□ -0.68
GGA3-211ENST00000582232 ANKRD9Q96BM1 317 aaPredicted RBP10.82□□□□□ -0.68
GGA3-211ENST00000582232 RNF31Q96EP0 1072 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 LRRC37BQ96QE4 947 aa10.82□□□□□ -0.68
GGA3-211ENST00000582232 CCDC106Q9BWC9 280 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms