RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PHF11Q9UIL8 331 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 ERRFI1Q9UJM3 462 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 ZNF223Q9UK11 482 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-220ENST00000581707 PPT2Q9UMR5 302 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 SLC5A6Q9Y289 635 aa18.18■□□□□ 0.5
SREBF1-220ENST00000581707 GOLGA8RI6L899 631 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 ZFAND5O76080 213 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 ETHE1O95571 254 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 DDAH2O95865 285 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 OTCP00480 354 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 SP1P08047 785 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 TAC1P20366 129 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 MST1P26927 711 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 TLX1P31314 330 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 TRHRP34981 398 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 BSGP35613 385 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 HLCSP50747 726 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 HNRNPH2P55795 449 aaKnown RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 PMP22Q01453 160 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 SRSF11Q05519 484 aaKnown RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 C10orf62Q5T681 223 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 FRG2Q64ET8 278 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 SLC25A25Q6KCM7 469 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 MORN4Q8NDC4 146 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 OR4F6Q8NGB9 312 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 OR14A16Q8NHC5 309 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 ACMSDQ8TDX5 336 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 ZNF483Q8TF39 744 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 FRG2BQ96QU4 278 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 C1QTNF3Q9BXJ4 246 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 DDX31Q9H8H2 851 aaKnown RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 TRIM45Q9H8W5 580 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-220ENST00000581707 TBK1Q9UHD2 729 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 OSGIN2Q9Y236 505 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 ATG4BQ9Y4P1 393 aa18.17■□□□□ 0.5
SREBF1-220ENST00000581707 A0A0A6YYD5 115 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 PROM1O43490 865 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 FGF17O60258 216 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 EEDO75530 441 aaKnown RBP18.16■□□□□ 0.5
SREBF1-220ENST00000581707 CDH13P55290 713 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 HERVK_113P63132 956 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 TNFRSF17Q02223 184 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 IFT88Q13099 833 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 MAPKAPK3Q16644 382 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 GGTA1PQ4G0N0 100 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 C18orf63Q68DL7 685 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 MRM1Q6IN84 353 aaKnown RBP18.16■□□□□ 0.5
SREBF1-220ENST00000581707 CYP20A1Q6UW02 462 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 GALNTL5Q7Z4T8 443 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 OR4N5Q8IXE1 308 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 TANKQ92844 425 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 ERVK-6Q9BXR3 956 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 LYARQ9NX58 379 aaKnown RBP18.16■□□□□ 0.5
SREBF1-220ENST00000581707 ASB4Q9Y574 426 aa18.16■□□□□ 0.5
SREBF1-220ENST00000581707 DOPEY1Q5JWR5 2465 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 DIDO1Q9BTC0 2240 aaKnown RBP18.15■□□□□ 0.5
SREBF1-220ENST00000581707 C17orf105B2RV13 164 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 PPP6CO00743 305 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 TMPRSS11DO60235 418 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 PRKNO60260 465 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-220ENST00000581707 ITGA10O75578 1167 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 SLC25A12O75746 678 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 SEMA3DO95025 777 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 FAM58BPP0C7Q3 252 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 RNF224P0DH78 156 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 PYGBP11216 843 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 GP1BBP13224 206 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 TSPAN8P19075 237 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 HSD17B3P37058 310 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 BUD31P41223 144 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-220ENST00000581707 KCNK10P57789 538 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 IGLV3-21P80748 117 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-220ENST00000581707 BIKQ13323 160 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 SGO1Q5FBB7 561 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 GFRALQ6UXV0 394 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 HSDL2Q6YN16 418 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 ZNF227Q86WZ6 799 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 TMEM156Q8N614 296 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 MZB1Q8WU39 189 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 UBLCP1Q8WVY7 318 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-220ENST00000581707 TMEM125Q96AQ2 219 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 OR8D2Q9GZM6 311 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 ELOVL6Q9H5J4 265 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 SEC14L3Q9UDX4 400 aa18.15■□□□□ 0.5
SREBF1-220ENST00000581707 A0A1B0GTL3 188 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 WIPF3A6NGB9 483 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 DLX3O60479 287 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 PRKRAO75569 313 aaKnown RBP18.14■□□□□ 0.49
SREBF1-220ENST00000581707 LDLRP01130 860 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 SHBGP04278 402 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 GSTA1P08263 222 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 COX7A2P14406 83 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 TNFRSF8P28908 595 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 STT3AP46977 705 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 FOLH1Q04609 750 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 CLCQ05315 142 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 C4orf17Q53FE4 359 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 LETMD1Q6P1Q0 360 aa18.14■□□□□ 0.49
SREBF1-220ENST00000581707 NUDT13Q86X67 352 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms