RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 GLYATL1Q969I3 302 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 CCDC47Q96A33 483 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 MRPL53Q96EL3 112 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 MOCOSQ96EN8 888 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 PRICKLE1Q96MT3 831 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 AGAP3Q96P47 875 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 NAP1L3Q99457 506 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 S1PR3Q99500 378 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 LGMNQ99538 433 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 PINK1Q9BXM7 581 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 TEX13AQ9BXU3 409 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 UBXN6Q9BZV1 441 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 WWP1Q9H0M0 922 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 KCNMB3Q9NPA1 279 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 THAP10Q9P2Z0 257 aaPredicted RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 UBQLN2Q9UHD9 624 aa3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 STRAPQ9Y3F4 350 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-205ENST00000581383 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 IGHV3-38A0A0C4DH36 116 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 MACROD2A1Z1Q3 448 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 OR5H15A6NDH6 313 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 H7C423 109 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 CCSO14618 274 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 TPBGLP0DKB5 382 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF10P21506 573 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ID1P41134 155 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 NSFP46459 744 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 PITPNBP48739 271 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 GEMP55040 296 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 CASP9P55211 416 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ABCE1P61221 599 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 RPS27AP62979 156 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 PPP1R8Q12972 351 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 MSLNQ13421 630 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 OR1C1Q15619 314 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 TAF1BQ53T94 588 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 PRAMEF7Q5VXH5 474 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 NEPROQ6NW34 567 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF613Q6PF04 617 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF730Q6ZMV8 503 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 KCNMB4Q86W47 210 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 WDR49Q8IV35 697 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 OR4N5Q8IXE1 308 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 CHCHD4Q8N4Q1 142 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 GPATCH11Q8N954 259 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 CCNYQ8ND76 341 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 URGCPQ8TCY9 931 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF599Q96NL3 588 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 TMEM237Q96Q45 408 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 GANQ9H2C0 597 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 CXXC4Q9H2H0 198 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 PARLQ9H300 379 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 TMEM245Q9H330 911 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 WDR41Q9HAD4 459 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 PIGVQ9NUD9 493 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 MRTO4Q9UKD2 239 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 SPAG9O60271 1321 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 GPRASP1Q5JY77 1395 aa3.89□□□□□ -1.79
SMCHD1-205ENST00000581383 IGHV4-30-2A0A087WSY4 118 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 SH3PXD2BA1X283 911 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ASB14A6NK59 587 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TMCO5BA8MYB1 307 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 SOCS3O14543 225 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF749O43361 778 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 SORBS2O94875 1100 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 OR6A2O95222 327 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TXNDC12O95881 172 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 SFTPBP07988 381 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ADORA3P0DMS8 318 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 CT45A8P0DMV1 189 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 CT45A9P0DMV2 189 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 CD1DP15813 335 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ZNF18P17022 549 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 GLRA1P23415 457 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 FCGR2BP31994 310 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 FCGR2CP31995 323 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 RPL9P32969 192 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 HNRNPFP52597 415 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 PEX3P56589 373 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 SRP54P61011 504 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TSTA3Q13630 321 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 LY6DQ14210 128 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 MEF2DQ14814 521 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 UPP1Q16831 310 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 EPC2Q52LR7 807 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 CT45A2Q5DJT8 189 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 RAB12Q6IQ22 244 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 MCM10Q7L590 875 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 C17orf64Q86WR6 236 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TBC1D10CQ8IV04 446 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 PRSS33Q8NF86 280 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 EXOC6Q8TAG9 804 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 ALKBH3Q96Q83 286 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TNFRSF13CQ96RJ3 184 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 RUFY1Q96T51 708 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 TRIM51Q9BSJ1 452 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 FUNDC2Q9BWH2 189 aa3.88□□□□□ -1.79
SMCHD1-205ENST00000581383 SLC26A1Q9H2B4 701 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms