RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 A4GALTQ9NPC4 353 aa16.66■□□□□ 0.26
TMCO1-207ENST00000580248 LHX9Q9NQ69 397 aa16.66■□□□□ 0.26
TMCO1-207ENST00000580248 WSB2Q9NYS7 404 aaPredicted RBP16.66■□□□□ 0.26
TMCO1-207ENST00000580248 ZNF451Q9Y4E5 1061 aa16.66■□□□□ 0.26
TMCO1-207ENST00000580248 NUMA1Q14980 2115 aa16.66■□□□□ 0.26
TMCO1-207ENST00000580248 A0A0A6YYD5 115 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PRSS38A1L453 326 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 LRIT2A6NDA9 550 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 C10orf142B7Z368 130 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 RTCAO00442 366 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 LCMT2O60294 686 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 MRPS14O60783 128 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 DIRAS1O95057 198 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 AQP1P29972 269 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 CMPK1P30085 196 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 CD6P30203 668 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 TSFMP43897 325 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NUP107P57740 925 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PPP2CBP62714 309 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PPP2CAP67775 309 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 CDK5R2Q13319 367 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 CTU2Q2VPK5 515 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 REEP3Q6NUK4 255 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 UBE3DQ7Z6J8 389 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 TSPYL5Q86VY4 417 aaPredicted RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 ATG16L2Q8NAA4 619 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 SRFBP1Q8NEF9 429 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 OR5AK3PQ8NH89 298 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PSMA8Q8TAA3 256 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 TAMM41Q96BW9 452 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 BARD1Q99728 777 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NRTNQ99748 197 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 RIBC2Q9H4K1 309 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 ACSL6Q9UKU0 697 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 GMPPBQ9Y5P6 360 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 SNX5Q9Y5X3 404 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 TECTAO75443 2155 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NUP214P35658 2090 aaPredicted RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 IGKV1-8A0A0C4DH67 115 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 TNFRSF11BO00300 401 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 SLC1A7O00341 560 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NOL3O60936 208 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 MITFO75030 526 aaPredicted RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PDE9AO76083 593 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 ANXA8P13928 327 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 RRM2P31350 389 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 ALDH9A1P49189 494 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 IL5RAQ01344 420 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 ADPRMQ3LIE5 342 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 KIAA1614Q5VZ46 1190 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 OR13F1Q8NGS4 319 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 GIPC3Q8TF64 312 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 ZNF300Q96RE9 604 aaPredicted RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PITX2Q99697 317 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 XKR8Q9H6D3 395 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NDUFAF4Q9P032 175 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NDRG4Q9ULP0 352 aaKnown RBP16.65■□□□□ 0.26
TMCO1-207ENST00000580248 SNX7Q9UNH6 387 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 TPRKBQ9Y3C4 175 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 NAALAD2Q9Y3Q0 740 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 PLEKHM1Q9Y4G2 1056 aa16.65■□□□□ 0.26
TMCO1-207ENST00000580248 IGHV1OR15-9A0A0B4J2B8 117 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SLC31A1O15431 190 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 LATO43561 262 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 TMPRSS11DO60235 418 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SEC14L2O76054 403 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 IL7RP16871 459 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 MAT2AP31153 395 aaKnown RBP16.64■□□□□ 0.25
TMCO1-207ENST00000580248 HOXA6P31267 233 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SSR2P43308 183 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 CLK3P49761 638 aaKnown RBP16.64■□□□□ 0.25
TMCO1-207ENST00000580248 TMBIM6P55061 237 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 CSNK2BP67870 215 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 RAPSNQ13702 412 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 NFATC4Q14934 902 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 GALNT5Q7Z7M9 940 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 OR2L3Q8NG85 312 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SH3GL3Q99963 347 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 GABARAPL3Q9BY60 117 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 PRDM8Q9NQV8 689 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SCN3BQ9NY72 215 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 PCDHGA2Q9Y5H1 932 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 SNX8Q9Y5X2 465 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 LYVE1Q9Y5Y7 322 aa16.64■□□□□ 0.25
TMCO1-207ENST00000580248 C5orf58C9J3I9 102 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 E9PQ18 207 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 TNFRSF10CO14798 259 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 AXIN1O15169 862 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 ANGPTL1O95841 491 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 JUNDP17535 347 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 HTR1BP28222 390 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 CCR5P51681 352 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 SLC9A5Q14940 896 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 NEDD8Q15843 81 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 LAIR2Q6ISS4 152 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 CEACAM20Q6UY09 585 aa16.63■□□□□ 0.25
TMCO1-207ENST00000580248 TSEN54Q7Z6J9 526 aaKnown RBP16.63■□□□□ 0.25
TMCO1-207ENST00000580248 MMP21Q8N119 569 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms