RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CXorf40BQ96DE9 158 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 SCARF2Q96GP6 870 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-217ENST00000577897 ITCHQ96J02 903 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 QRFPRQ96P65 431 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 HBEGFQ99075 208 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 GPATCH1Q9BRR8 931 aaKnown RBP13.32□□□□□ -0.28
SREBF1-217ENST00000577897 VCXQ9H320 206 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 ACTL8Q9H568 366 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 FARSBQ9NSD9 589 aaKnown RBP13.32□□□□□ -0.28
SREBF1-217ENST00000577897 SIDT1Q9NXL6 827 aaKnown RBP13.32□□□□□ -0.28
SREBF1-217ENST00000577897 PSMD13Q9UNM6 376 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 ENTPD4Q9Y227 616 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 ZNF451Q9Y4E5 1061 aa13.32□□□□□ -0.28
SREBF1-217ENST00000577897 DCHS2Q6V1P9 2916 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 CROCCQ5TZA2 2017 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 ANKUB1A6NFN9 424 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 PGRP06401 933 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 ERGP11308 486 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 NPPBP16860 134 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 PTX3P26022 381 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 GSTM2P28161 218 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 GRK3P35626 688 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 HPCAL1P37235 193 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 GSTM5P46439 218 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 CCR8P51685 355 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 HNRNPFP52597 415 aaKnown RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 RPS18P62269 152 aaKnown RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 DDX39BQ13838 428 aaKnown RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 CEACAM7Q14002 265 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 CCNIQ14094 377 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 SLBPQ14493 270 aaKnown RBP eCLIP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 TLR1Q15399 786 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 IRAK1BP1Q5VVH5 260 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 WASH2PQ6VEQ5 465 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 FAM83HQ6ZRV2 1179 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 R3HCC1LQ7Z5L2 792 aaKnown RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 GPR180Q86V85 440 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 BHLHE22Q8NFJ8 381 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 OR7G3Q8NG95 312 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 OR5AR1Q8NGP9 310 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 NEIL2Q969S2 332 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 OR6C1Q96RD1 312 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 OR52E6Q96RD3 313 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 ING2Q9H160 280 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 NT5DC2Q9H857 520 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 IL1RL2Q9HB29 575 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 WASH6PQ9NQA3 447 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 NKX1-2Q9UD57 310 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 CD300AQ9UGN4 299 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 WBP11Q9Y2W2 641 aaKnown RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 PRKAB1Q9Y478 270 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 PCDHGA6Q9Y5G7 932 aa13.31□□□□□ -0.28
SREBF1-217ENST00000577897 ANKHD1Q8IWZ3 2542 aaKnown RBP13.31□□□□□ -0.28
SREBF1-217ENST00000577897 ANKDD1BA6NHY2 528 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 AQP12BA6NM10 295 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 UMPSP11172 480 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 XRCC1P18887 633 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-217ENST00000577897 IL10P22301 178 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 SEPHS1P49903 392 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 RAB28P51157 221 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 NEK2P51955 445 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 GFERP55789 205 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 C21orf58P58505 322 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ABATP80404 500 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 KIAA0040Q15053 153 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ZXDCQ2QGD7 858 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-217ENST00000577897 FAM174BQ3ZCQ3 159 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 CCSMST1Q4G0I0 132 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 MTX3Q5HYI7 312 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 C6orf10Q5SRN2 563 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-217ENST00000577897 WLSQ5T9L3 541 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ANXA8L1Q5VT79 327 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 TMIGD1Q6UXZ0 262 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 PAGE2Q7Z2X7 111 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 RETREG3Q86VR2 466 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 AQP12AQ8IXF9 295 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 NATD1Q8N6N6 113 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 HIPK4Q8NE63 616 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 THAP4Q8WY91 577 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 VPS33AQ96AX1 596 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 SNRNP40Q96DI7 357 aaKnown RBP13.3□□□□□ -0.28
SREBF1-217ENST00000577897 FCRL1Q96LA6 429 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 GBP5Q96PP8 586 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 OR4K3Q96R72 315 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 KCTD14Q9BQ13 255 aaPredicted RBP13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ECSITQ9BQ95 431 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 TACO1Q9BSH4 297 aaKnown RBP13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ALG2Q9H553 416 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ATAD3AQ9NVI7 634 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ASF1BQ9NVP2 202 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 SIRT5Q9NXA8 310 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 SLC23A2Q9UGH3 650 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
SREBF1-217ENST00000577897 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
SREBF1-217ENST00000577897 EML2O95834 649 aa13.29□□□□□ -0.28
SREBF1-217ENST00000577897 TCN1P20061 433 aaPredicted RBP13.29□□□□□ -0.28
SREBF1-217ENST00000577897 SLC6A2P23975 617 aa13.29□□□□□ -0.28
SREBF1-217ENST00000577897 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms