RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SLC15A4Q8N697 577 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 GOT1L1Q8NHS2 421 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 NUBPLQ8TB37 319 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 PTPMT1Q8WUK0 201 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 SCYL1Q96KG9 808 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 KRT12Q99456 494 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 RHOJQ9H4E5 214 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 LIN28AQ9H9Z2 209 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 QPCTLQ9NXS2 382 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 ALKBH4Q9NXW9 302 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 TEX264Q9Y6I9 313 aa13.15□□□□□ -0.3
SMARCD2-205ENST00000577686 CTAGE15A4D2H0 777 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 PINLYPA6NC86 204 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TMEM200CA6NKL6 621 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 DVL2O14641 736 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TCP1P17987 556 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 CPN2P22792 545 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TLX1P31314 330 aaPredicted RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 GGT5P36269 586 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 GDF5P43026 501 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 SSR2P43308 183 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 IST1P53990 364 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TAS2R39P59534 338 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 IRF8Q02556 426 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 GTF3C1Q12789 2109 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 HP1BP3Q5SSJ5 553 aaPredicted RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 CTAGE6Q86UF2 777 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 IGDCC3Q8IVU1 814 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TMEM52Q8NDY8 209 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 RBM18Q96H35 190 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 CSF3RQ99062 836 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 AICDAQ9GZX7 198 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 CD274Q9NZQ7 290 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 CNIH4Q9P003 139 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 MTRF1LQ9UGC7 380 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 ADGRE2Q9UHX3 823 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 PHF11Q9UIL8 331 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 FOXD3Q9UJU5 478 aaPredicted RBP13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 IKZF3Q9UKT9 509 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 SNX12Q9UMY4 172 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 L3MBTL1Q9Y468 752 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 ATG4BQ9Y4P1 393 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 CLDN16Q9Y5I7 305 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 TACC2O95359 2948 aa13.14□□□□□ -0.31
SMARCD2-205ENST00000577686 DCHS2Q6V1P9 2916 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 A0A0G2JMM0 328 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 A0A0G2JNJ9 132 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 A0A1W2PPB8 328 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 A0A1W2PRS3 328 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 KIR3DP1A8MWS1 328 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 CAPN14A8MX76 684 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 SERPINB3P29508 390 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 MSH2P43246 934 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 RPL21P46778 160 aaKnown RBP13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 RAP1GDS1P52306 607 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 PGGT1BP53609 377 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 PHEXP78562 749 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 DR1Q01658 176 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 DOC2AQ14183 400 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 ZNF460Q14592 562 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 TBCCQ15814 346 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 PIGGQ5H8A4 983 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 TBCELQ5QJ74 424 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 FBXW10Q5XX13 1052 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 LRRC70Q7Z2Q7 622 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 CAMKMTQ7Z624 323 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 TGIF2LYQ8IUE0 185 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 ZZZ3Q8IYH5 903 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 WDR34Q96EX3 536 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 CXXC4Q9H2H0 198 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 CLEC4MQ9H2X3 399 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 TUBA8Q9NY65 449 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 Q9UFV3 132 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 LIPGQ9Y5X9 500 aa13.13□□□□□ -0.31
SMARCD2-205ENST00000577686 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 CCNT2O60583 730 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 DIAPH2O60879 1101 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 LDB3O75112 727 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 CTAG2O75638 210 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 CCL3P10147 92 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 ATP5A1P25705 553 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 UQCRC1P31930 480 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 BUD31P41223 144 aaPredicted RBP13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 STT3AP46977 705 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 HSPA7P48741 367 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 ASCL1P50553 236 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 RPP38P78345 283 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 ASPHQ12797 758 aa13.12□□□□□ -0.31
SMARCD2-205ENST00000577686 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms