RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SLC15A4Q8N697 577 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 OR2L5Q8NG80 312 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 NUBPLQ8TB37 319 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 SLC2A12Q8TD20 617 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
COPS3-214ENST00000577246 ARSGQ96EG1 525 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 ALOXE3Q9BYJ1 711 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 ROGDIQ9GZN7 287 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 REXO4Q9GZR2 422 aaKnown RBP12.32□□□□□ -0.44
COPS3-214ENST00000577246 PLEKHF2Q9H8W4 249 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 CNIH4Q9P003 139 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 DAPP1Q9UN19 280 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 SLC22A14Q9Y267 594 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 SPACA6W5XKT8 324 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 FLNAP21333 2647 aaKnown RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 A0A0G2JN53 185 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CTAGE15A4D2H0 777 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CLCA1A8K7I4 914 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CYR61O00622 381 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CLEC3AO75596 197 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CCDC175P0C221 793 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 C1GALT1C1LP0DN25 315 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 PGAM1P18669 254 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 HNRNPH1P31943 449 aaKnown RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 PIGAP37287 484 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 MAGEA3P43357 314 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 HNRNPFP52597 415 aaKnown RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 PLA2G16P53816 162 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 LIM2P55344 173 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CRYMQ14894 314 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 ACSF3Q4G176 576 aaPredicted RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 PIGGQ5H8A4 983 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 RBM20Q5T481 1227 aaKnown RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 CTAGE6Q86UF2 777 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 TMEM139Q8IV31 216 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 TMEM52Q8NDY8 209 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 PDLIM5Q96HC4 596 aaKnown RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 RUNDC3BQ96NL0 473 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 EGFL8Q99944 293 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 CAPS2Q9BXY5 557 aa12.31□□□□□ -0.44
COPS3-214ENST00000577246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.31□□□□□ -0.44
COPS3-214ENST00000577246 MAP1AP78559 2803 aaPredicted RBP12.31□□□□□ -0.44
COPS3-214ENST00000577246 C15orf38-AP3S2A0A0A6YYH1 394 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 OPRM1P35372 400 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 CDKL1Q00532 357 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 ASPHQ12797 758 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SLBPQ14493 270 aaKnown RBP eCLIP12.3□□□□□ -0.44
COPS3-214ENST00000577246 ZNF791Q3KP31 576 aaPredicted RBP12.3□□□□□ -0.44
COPS3-214ENST00000577246 TBCELQ5QJ74 424 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SBSNQ6UWP8 590 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SEM1Q6ZVN7 128 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 CNTN4Q8IWV2 1026 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SRFBP1Q8NEF9 429 aaKnown RBP12.3□□□□□ -0.44
COPS3-214ENST00000577246 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 FAM45AQ8TCE6 357 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SREK1Q8WXA9 508 aaKnown RBP12.3□□□□□ -0.44
COPS3-214ENST00000577246 ANKRD7Q92527 254 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SPACA9Q96E40 222 aaPredicted RBP12.3□□□□□ -0.44
COPS3-214ENST00000577246 CAPZA3Q96KX2 299 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 ART5Q96L15 291 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 QRFPRQ96P65 431 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 REPIN1Q9BWE0 567 aaKnown RBP12.3□□□□□ -0.44
COPS3-214ENST00000577246 AICDAQ9GZX7 198 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SLC6A15Q9H2J7 730 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 NT5DC2Q9H857 520 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 LYRM4Q9HD34 91 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 SEMA4BQ9NPR2 832 aaPredicted RBP12.3□□□□□ -0.44
COPS3-214ENST00000577246 VWA7Q9Y334 891 aa12.3□□□□□ -0.44
COPS3-214ENST00000577246 EEF1E1-BLOC1S5C9J1V9 151 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 EEF1E1O43324 174 aaKnown RBP12.29□□□□□ -0.44
COPS3-214ENST00000577246 WDR47O94967 919 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 AHSGP02765 367 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 CD53P19397 219 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 GDF1P27539 372 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 CERS1P27544 350 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 SERPINB3P29508 390 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 RPL21P46778 160 aaKnown RBP12.29□□□□□ -0.44
COPS3-214ENST00000577246 KCNC1P48547 511 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 BIKQ13323 160 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 PPP1R3AQ16821 1122 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 ADPRMQ3LIE5 342 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 ABHD17CQ6PCB6 329 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 FRA10AC1Q70Z53 315 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 P3H2Q8IVL5 708 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 ZNF321PQ8N8H1 164 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 NAXEQ8NCW5 288 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 LRRN4CLQ8ND94 238 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 SIMC1Q8NDZ2 872 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 ZNF597Q96LX8 424 aa12.29□□□□□ -0.44
COPS3-214ENST00000577246 JSRP1Q96MG2 331 aaPredicted RBP12.29□□□□□ -0.44
COPS3-214ENST00000577246 DACH2Q96NX9 599 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms