RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SLC13A3Q8WWT9 602 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 ITLN2Q8WWU7 325 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 RELTQ969Z4 430 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 ZBTB8AQ96BR9 441 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 TRIM44Q96DX7 344 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 PBKQ96KB5 322 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 OR4K3Q96R72 315 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 OLFM1Q99784 485 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 FAM167BQ9BTA0 163 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 KCNK13Q9HB14 408 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 PARVBQ9HBI1 364 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 ANKHQ9HCJ1 492 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 KLHL1Q9NR64 748 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 LANCL2Q9NS86 450 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 H2AFY2Q9P0M6 372 aaPredicted RBP5.84□□□□□ -1.47
NUP88-212ENST00000576708 ABI3Q9P2A4 366 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 SEC14L3Q9UDX4 400 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 ENTPD4Q9Y227 616 aa5.84□□□□□ -1.47
NUP88-212ENST00000576708 CRYBG3Q68DQ2 2970 aa5.84□□□□□ -1.48
NUP88-212ENST00000576708 NOTCH2Q04721 2471 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 HEATR5BQ9P2D3 2071 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 SCN3AQ9NY46 2000 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 PRAMEF25A6NGN4 478 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 A8MUA0 341 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 C4orf51C9J302 202 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 NPIPA5E9PKD4 350 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 PGRMC1O00264 195 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 DNALI1O14645 258 aaPredicted RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 NDUFS4O43181 175 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 HNRNPRO43390 633 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 CHST10O43529 356 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 OR1F1O43749 312 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 B4GALT2O60909 372 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 GUCA1CO95843 209 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CRYABP02511 175 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 C8GP07360 202 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ZNF888P0CJ79 500 aaPredicted RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 ICAM2P13598 275 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 PGAM1P18669 254 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CA7P43166 264 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 RGS4P49798 205 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 OR4D2P58180 307 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 RAB8AP61006 207 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 BTG2P78543 158 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ADORA2A-AS1P86434 159 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 HSF1Q00613 529 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ACTN3Q08043 901 aaPredicted RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 PTK6Q13882 451 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 USP10Q14694 798 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 ABRAXAS2Q15018 415 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 PPP1R7Q15435 360 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CDSNQ15517 529 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 OR1C1Q15619 314 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 NSDHLQ15738 373 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 INAQ16352 499 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 VMACQ2NL98 169 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 C18orf21Q32NC0 220 aaPredicted RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 DEFB134Q4QY38 66 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 HECTD2Q5U5R9 776 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ARMC3Q5W041 872 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 PLAG1Q6DJT9 500 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 UGT3A1Q6NUS8 523 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 H3F3CQ6NXT2 135 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 TRMT10BQ6PF06 316 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 LCTLQ6UWM7 567 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 MRGPRGQ86SM5 289 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 MCEMP1Q8IX19 187 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 LMNTD2Q8IXW0 634 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 MYO1HQ8N1T3 1032 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 AFAP1L2Q8N4X5 818 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 MDS2Q8NDY4 140 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 SUN3Q8TAQ9 357 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CALML6Q8TD86 181 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CFAP36Q96G28 342 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 SNF8Q96H20 258 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ZNF354BQ96LW1 612 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 TSNARE1Q96NA8 513 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 OSBPL9Q96SU4 736 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 WDR83Q9BRX9 315 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 AICDAQ9GZX7 198 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 DDX47Q9H0S4 455 aaKnown RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 RHBGQ9H310 441 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 KLHL31Q9H511 634 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CDCP1Q9H5V8 836 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ARL15Q9NXU5 204 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 TAS2R13Q9NYV9 303 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 C19orf25Q9UFG5 118 aaPredicted RBP5.83□□□□□ -1.48
NUP88-212ENST00000576708 ASIC3Q9UHC3 531 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 TINAGQ9UJW2 476 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 NPIPA1Q9UND3 350 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 JRKLQ9Y4A0 524 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 PMF1-BGLAPU3KQ54 211 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 CPAMD8Q8IZJ3 1885 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 ITPR2Q14571 2701 aa5.83□□□□□ -1.48
NUP88-212ENST00000576708 A0A0G2JN53 185 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 NPEPPSL1A6NEC2 478 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 ENO4A6NNW6 628 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 GABRR3A8MPY1 467 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 MAGEB17A8MXT2 336 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 C19orf84I3L1E1 186 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms