RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 RPA4Q13156 261 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 PTGES3Q15185 160 aaKnown RBP17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 COMMD6Q7Z4G1 85 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 GPR149Q86SP6 731 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 COL2A1P02458 1487 aaPredicted RBP17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 ALPK2Q86TB3 2170 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 PRNPP04156 253 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 TYRP14679 529 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 ZNF10P21506 573 aaPredicted RBP17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 TNFSF8P32971 234 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 CRTC1Q6UUV9 634 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 ZNF367Q7RTV3 350 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 LCN9Q8WX39 176 aa17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 RERGQ96A58 199 aaPredicted RBP17.14■□□□□ 0.33
ATPAF1-214ENST00000576409 OR7A17O14581 309 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 EPHA2P29317 976 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 CCR7P32248 378 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 RGS6P49758 472 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 CLK3P49761 638 aaKnown RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ADARB1P78563 741 aaKnown RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ADNP2Q6IQ32 1131 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 C6orf120Q7Z4R8 191 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 KLBQ86Z14 1044 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 OR8J1Q8NGP2 316 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 MUL1Q969V5 352 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 FUZQ9BT04 418 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 NMNAT1Q9HAN9 279 aaPredicted RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 PPIEQ9UNP9 301 aaKnown RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 UGT2A1Q9Y4X1 527 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ANKRD36CQ5JPF3 1778 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 A0A1W2PQ09 198 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ZNF860A6NHJ4 632 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ANHXE9PGG2 379 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 NDUFS4O43181 175 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 SLC10A3P09131 477 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 CSNK2A2P19784 350 aaPredicted RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 IDSP22304 550 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ARF5P84085 180 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 PGBD2Q6P3X8 592 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 COX18Q8N8Q8 333 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 JPH3Q8WXH2 748 aaPredicted RBP17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 TBC1D24Q9ULP9 559 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 GABRR3A8MPY1 467 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 NUAK1O60285 661 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ENTPD6O75354 484 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 OAZ2O95190 189 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 DRD5P21918 477 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 KELP23276 732 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 LRRC32Q14392 662 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 HLA-DQA1Q5Y7H0 255 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 PNCKQ6P2M8 343 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 PRSS58Q8IYP2 241 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 TMEM19Q96HH6 336 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 ABCD2Q9UBJ2 740 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 PCDHGA3Q9Y5H0 932 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
ATPAF1-214ENST00000576409 TARM1B6A8C7 271 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ADAM12O43184 909 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 LATO43561 262 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 SEC14L2O76054 403 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 PTHP01270 115 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 AMD1P17707 334 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 LIPAP38571 399 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 TRIB2Q92519 343 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ZSCAN5AQ9BUG6 496 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ELL3Q9HB65 397 aaPredicted RBP17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 C12orf4Q9NQ89 552 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 SARDHQ9UL12 918 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 PRMT3O60678 531 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 PTTG1O95997 202 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 IL7P13232 177 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 FKBP1BP68106 108 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 HOXC5Q00444 222 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 HYAL2Q12891 473 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ZNF557Q8N988 423 aaPredicted RBP17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 OR4K5Q8NGD3 323 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 OR8K3Q8NH51 312 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 GGHQ92820 318 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 RIPOR3Q96MK2 946 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 PHPT1Q9NRX4 125 aaPredicted RBP17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 MARK1Q9P0L2 795 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ANKMY1Q9P2S6 941 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 DOCK2Q92608 1830 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 SCN1AP35498 2009 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 PRAMEF12O95522 483 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 CD9P21926 228 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ALAS2P22557 587 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 HOXD9P28356 352 aaPredicted RBP17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 PTGS2P35354 604 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 CCR8P51685 355 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 NADSYN1Q6IA69 706 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 BCDIN3DQ7Z5W3 292 aaKnown RBP17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 ATP6V1C2Q8NEY4 427 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 NELL2Q99435 816 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 TMEM121BQ9BXQ6 578 aaPredicted RBP17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 OR2B2Q9GZK3 357 aa17.12■□□□□ 0.33
ATPAF1-214ENST00000576409 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms