RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 DGAT2L6Q6ZPD8 337 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 COMMD6Q7Z4G1 85 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ANKRD37Q7Z713 158 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 TREML1Q86YW5 311 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 KIF2BQ8N4N8 673 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 C1orf52Q8N6N3 182 aaKnown RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF321PQ8N8H1 164 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 TTLQ8NG68 377 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 SNRNP27Q8WVK2 155 aaKnown RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 TBC1D20Q96BZ9 403 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CMTM7Q96FZ5 175 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 WDR77Q9BQA1 342 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CCDC28BQ9BUN5 200 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 NUDT9Q9BW91 350 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CCDC106Q9BWC9 280 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF385DQ9H6B1 395 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 WDR54Q9H977 334 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 COPS7BQ9H9Q2 264 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 MKKSQ9NPJ1 570 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF71Q9NQZ8 489 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ARL8BQ9NVJ2 186 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 KCMF1Q9P0J7 381 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 VTI1BQ9UEU0 232 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ZDHHC2Q9UIJ5 367 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 POLHQ9Y253 713 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 PADI2Q9Y2J8 665 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ATG4BQ9Y4P1 393 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 PCDHGA11Q9Y5H2 935 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CSAG2Q9Y5P2 127 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 IGKV3D-11A0A0A0MRZ8 115 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 IGHV1-45A0A0A0MS14 117 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 A0A1W2PR48 441 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 HRKO00198 91 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CYR61O00622 381 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PIP5K1BO14986 540 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 B3GALT2O43825 422 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 FGF17O60258 216 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PRKNO60260 465 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 SCELO95171 688 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CBX6O95503 412 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 MLYCDO95822 493 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 AIFM1O95831 613 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 F10P00742 488 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 FGF4P08620 206 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 LINC00032P0C843 101 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 C8orf89P0DMQ9 161 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 KITP10721 976 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 MMP11P24347 488 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PIK3CBP42338 1070 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CCL11P51671 97 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 EMP2P54851 167 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 MTTPP55157 894 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PKNOX1P55347 436 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 RAB38P57729 211 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 TNFRSF17Q02223 184 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 SLAMF1Q13291 335 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PDCD2Q16342 344 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 B3GNTL1Q67FW5 361 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 FCRLBQ6BAA4 426 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 OR4C11Q6IEV9 310 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 METTL2BQ6P1Q9 378 aaKnown RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 BORAQ6PGQ7 559 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PARP9Q8IXQ6 854 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 ZSCAN1Q8NBB4 408 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 FDCSPQ8NFU4 85 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CDC26Q8NHZ8 85 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 TWIST2Q8WVJ9 160 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 UBE2E3Q969T4 207 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 FAR2Q96K12 515 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 MAGEB10Q96LZ2 347 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 C3orf30Q96M34 536 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 KCNC2Q96PR1 638 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 SERINC2Q96SA4 455 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 TUBB6Q9BUF5 446 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 SLC29A3Q9BZD2 475 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 TGIF2Q9GZN2 237 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PITHD1Q9GZP4 211 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 ING2Q9H160 280 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 C14orf105Q9NVL8 296 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 LUZP4Q9P127 313 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 DAPP1Q9UN19 280 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CDC14AQ9UNH5 594 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 TP53TG5Q9Y2B4 290 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CCL27Q9Y4X3 112 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 POLR3HQ9Y535 204 aaPredicted RBP7.42□□□□□ -1.22
CCDC40-215ENST00000576033 ASB4Q9Y574 426 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 CAPN7Q9Y6W3 813 aa7.42□□□□□ -1.22
CCDC40-215ENST00000576033 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ATP6AP2A0A1C7CYW4 349 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PYCARD-AS1I3L0S3 204 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 FOXE1O00358 373 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SDHDO14521 159 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 AZIN1O14977 448 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 PGRMC2O15173 223 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 SLC22A2O15244 555 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 NME6O75414 186 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-215ENST00000576033 CRCPO75575 148 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ATP6AP2O75787 350 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 C1QL1O75973 258 aa7.41□□□□□ -1.22
CCDC40-215ENST00000576033 ITGAMP11215 1152 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms