RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PTPN7P35236 360 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 FDFT1P37268 417 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 HNF4AP41235 474 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 MARCKSL1P49006 195 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 PCYT1AP49585 367 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 MTTPP55157 894 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 RAB38P57729 211 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 RAB8AP61006 207 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 STXBP1P61764 594 aaKnown RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 ASPHQ12797 758 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 STX4Q12846 297 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 CUL1Q13616 776 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 RCN2Q14257 317 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 CAPRIN1Q14444 709 aaKnown RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 TOMM20Q15388 145 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 SPA17Q15506 151 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 MPEG1Q2M385 716 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 ASTE1Q2TB18 679 aaPredicted RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 NHSL2Q5HYW2 709 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 PCID2Q5JVF3 399 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 LRRC8EQ6NSJ5 796 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 C11orf63Q6NUN7 778 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 LCTLQ6UWM7 567 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 MILR1Q7Z6M3 343 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 TMEM139Q8IV31 216 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 ZNF595Q8IYB9 648 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 GCNT2Q8N0V5 402 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 PRELID2Q8N945 189 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 FAM47BQ8NA70 645 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 FAM13CQ8NE31 585 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 MNS1Q8NEH6 495 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 RNF217Q8TC41 542 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 ZPLD1Q8TCW7 415 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 SREK1Q8WXA9 508 aaKnown RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 ASB11Q8WXH4 323 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 ROBO4Q8WZ75 1007 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 CAVIN3Q969G5 261 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 ALKBH8Q96BT7 664 aaKnown RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 SPACA9Q96E40 222 aaPredicted RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 CCDC42Q96M95 316 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 QRFPRQ96P65 431 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 HS3ST6Q96QI5 342 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 TCF12Q99081 682 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 OSBPL8Q9BZF1 889 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 TSGA10Q9BZW7 698 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 OR8D2Q9GZM6 311 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 SHARPINQ9H0F6 387 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 CCDC68Q9H2F9 335 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 KCNF1Q9H3M0 494 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 GOLPH3Q9H4A6 298 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 TMEM160Q9NX00 188 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 ZFP69BQ9UJL9 534 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 INTUQ9ULD6 942 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 CRYL1Q9Y2S2 319 aa5.39□□□□□ -1.55
SMG6-219ENST00000575663 EPN1Q9Y6I3 576 aaPredicted RBP5.39□□□□□ -1.55
SMG6-219ENST00000575663 TLN2Q9Y4G6 2542 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 GFYI3L273 518 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 EIF3FO00303 357 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 DLX3O60479 287 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SMNDC1O75940 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMG6-219ENST00000575663 RCBTB2O95199 551 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 C1QAP02745 245 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 HPNP05981 417 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 POU2F1P14859 743 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 PAMP19021 973 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 TNNI3P19429 210 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 OGNP20774 298 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 SAT1P21673 171 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 CHMP24386 653 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SERPINB3P29508 390 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 HPDP32754 393 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 CTNNA1P35221 906 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 SOX18P35713 384 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 AHRP35869 848 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 CD79BP40259 229 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 MSH2P43246 934 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SCTRP47872 440 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 KCNJ5P48544 419 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 MASP1P48740 699 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 CDK9P50750 372 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 CLCN7P51798 805 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 TERF1P54274 439 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 HADHBP55084 474 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 GDF10P55107 478 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 FAM27E3Q08E93 113 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 FOXF2Q12947 444 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SP140Q13342 867 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 NAE1Q13564 534 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SERTAD2Q14140 314 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 CSHL1Q14406 222 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 TCEAL1Q15170 157 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ZNF791Q3KP31 576 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 PIGGQ5H8A4 983 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 BEX5Q5H9J7 111 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 LIPNQ5VXI9 398 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 VASNQ6EMK4 673 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ADGRD1Q6QNK2 874 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 AGTRAPQ6RW13 159 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ZNF704Q6ZNC4 412 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 CLNKQ7Z7G1 428 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms