RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FBXO8Q9NRD0 319 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 MAP10Q9P2G4 905 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 UTS2RQ9UKP6 389 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 B4E171 279 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 CYR61O00622 381 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 NTRK1P04629 796 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 TSPAN7P41732 249 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 NOVA1P51513 510 aaKnown RBP22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 HNRNPFP52597 415 aaKnown RBP22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC25A3Q00325 362 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC48A1Q6P1K1 146 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 TMEM52Q8NDY8 209 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 LIN37Q96GY3 246 aaPredicted RBP22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 PEX11GQ96HA9 241 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 RAB3IPQ96QF0 476 aaPredicted RBP22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 WDR41Q9HAD4 459 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 EHD3Q9NZN3 535 aa22.68■■□□□ 1.22
ATPAF1-213ENST00000574428 TBX19O60806 448 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 RNH1P13489 461 aaKnown RBP22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 TLX1P31314 330 aaPredicted RBP22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 ETV5P41161 510 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 ART3Q13508 389 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 KIF26BQ2KJY2 2108 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 COQ5Q5HYK3 327 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 CLECL1Q8IZS7 167 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 PCYOX1LQ8NBM8 494 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 GTF2H4Q92759 462 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 CLIP3Q96DZ5 547 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 RPF2Q9H7B2 306 aaKnown RBP22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 FAM120CQ9NX05 1096 aaKnown RBP22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 TAS2R1Q9NYW7 299 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 CES1P1Q9UKY3 287 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 CDC14AQ9UNH5 594 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 PCDHB3Q9Y5E6 796 aa22.67■■□□□ 1.22
ATPAF1-213ENST00000574428 SCN2BO60939 215 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 CEACAM1P13688 526 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 CPOXP36551 454 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 MAPK10P53779 464 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 C6orf10Q5SRN2 563 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 OR52E8Q6IFG1 317 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 PRMT9Q6P2P2 845 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 DNAJC14Q6Y2X3 702 aaPredicted RBP22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 OR51Q1Q8NH59 317 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 COL26A1Q96A83 441 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 MIEF2Q96C03 454 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 ZNF764Q96H86 408 aaPredicted RBP22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 BTBD10Q9BSF8 475 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 INPP5KQ9BT40 448 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 ZNF304Q9HCX3 659 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 SERHLQ9NQF3 203 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 SLAMF8Q9P0V8 285 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC30A4O14863 429 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 PDPK1O15530 556 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 ERAL1O75616 437 aaKnown RBP22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 FBLP22087 321 aaKnown RBP22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 NFYCQ13952 458 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 DSG2Q14126 1118 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 MSANTD1Q6ZTZ1 278 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 DNAJB14Q8TBM8 379 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 GBP5Q96PP8 586 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC39A3Q9BRY0 314 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 YIPF2Q9BWQ6 316 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 RMND5AQ9H871 391 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 SLC35C2Q9NQQ7 365 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 PISDQ9UG56 409 aa22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 CDV3Q9UKY7 258 aaKnown RBP22.66■■□□□ 1.22
ATPAF1-213ENST00000574428 A0A1W2PNU3 283 aaPredicted RBP22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 A0A1W2PS29 197 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 ZNF28P17035 718 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 XCR1P46094 333 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 ERV3-1Q14264 604 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 ZNF750Q32MQ0 723 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 ARHGAP40Q5TG30 622 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 ANXA8L1Q5VT79 327 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 DPP10Q8N608 796 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 ITCHQ96J02 903 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 CLK4Q9HAZ1 481 aaKnown RBP22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 SLAMF7Q9NQ25 335 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 TAS2R7Q9NYW3 318 aa22.65■■□□□ 1.22
ATPAF1-213ENST00000574428 CCDC187A0A096LP49 1063 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 PRSS51A0A1B0GVH4 220 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 GYG2O15488 501 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 CDC123O75794 336 aaPredicted RBP22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 JMJD7P0C870 316 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 C8orf89P0DMQ9 161 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 CDKN2CP42773 168 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 CAPRIN1Q14444 709 aaKnown RBP22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 DHDDSQ86SQ9 333 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 OR4N5Q8IXE1 308 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 VPS37AQ8NEZ2 397 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 CADM1Q9BY67 442 aaKnown RBP22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 TRPC4Q9UBN4 977 aa22.64■■□□□ 1.22
ATPAF1-213ENST00000574428 RNASET2O00584 256 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 MGRN1O60291 552 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 CPSF4O95639 269 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 HBQ1P09105 142 aa22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 DDX5P17844 614 aaKnown RBP22.63■■□□□ 1.21
ATPAF1-213ENST00000574428 ID2Q02363 134 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms