RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	AGAP4	Q96P64	663 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SLC6A16	Q9GZN6	736 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	RABEP2	Q9H5N1	569 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	MRGBP	Q9NV56	204 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	MKL2	Q9ULH7	1088 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	NAALAD2	Q9Y3Q0	740 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	IGHV1-45	A0A0A0MS14	117 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	NSG1	A0A0A6YYJ2	146 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SGK494	L7N484	410 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	GALR3	O60755	368 aa	Predicted RBP	13.53	□□□□□ -0.24
ABR-223	ENST00000573895	ALOX12B	O75342	701 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	CLEC3A	O75596	197 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	KLHL18	O94889	574 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	C8orf89	P0DMQ9	161 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SMIM10L1	P0DMW3	83 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	PCNA	P12004	261 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	ICAM2	P13598	275 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	PRPH2	P23942	346 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	XCR1	P46094	333 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	RAPSN	Q13702	412 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	IMPG1	Q17R60	797 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SLC9B1	Q4ZJI4	515 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SGO1	Q5FBB7	561 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	CHSY3	Q70JA7	882 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SPATA19	Q7Z5L4	167 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	KBTBD2	Q8IY47	623 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	ZADH2	Q8N4Q0	377 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	ZCCHC10	Q8TBK6	192 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	CREB3L4	Q8TEY5	395 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	MIB2	Q96AX9	1013 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	C8orf44	Q96CB5	159 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	TUBGCP3	Q96CW5	907 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	MTFMT	Q96DP5	389 aa	Known RBP	13.53	□□□□□ -0.24
ABR-223	ENST00000573895	CMTM7	Q96FZ5	175 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SMIM10	Q96HG1	83 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	LMF1	Q96S06	567 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	SERPINI1	Q99574	410 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	VN1R1	Q9GZP7	353 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	ZNF700	Q9H0M5	742 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	TCF7L2	Q9NQB0	619 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	FARSB	Q9NSD9	589 aa	Known RBP	13.53	□□□□□ -0.24
ABR-223	ENST00000573895	VPS29	Q9UBQ0	182 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.53	□□□□□ -0.24
ABR-223	ENST00000573895	TRIM33	Q9UPN9	1127 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	CCL27	Q9Y4X3	112 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	CPAMD8	Q8IZJ3	1885 aa		13.53	□□□□□ -0.24
ABR-223	ENST00000573895	TTLL8	A6PVC2	850 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	MASP2	O00187	686 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	CCDC22	O60826	627 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	RDH16	O75452	317 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	RSL1D1	O76021	490 aa	Known RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895	SERPINA7	P05543	415 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	LBP	P18428	481 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	EPHA3	P29320	983 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	HTR6	P50406	440 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	NEK2	P51955	445 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	ARFIP1	P53367	373 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	STXBP1	P61764	594 aa	Known RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895		Q0VFX4	171 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	HYAL2	Q12891	473 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	MAD2L1	Q13257	205 aa	Predicted RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895	CUL3	Q13618	768 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	TMEM35A	Q53FP2	167 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895	SLC6A19	Q695T7	634 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	OGFOD2	Q6N063	350 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	SCIMP	Q6UWF3	145 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895		Q6ZSR9	355 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895		Q8NA96	180 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	PLPP5	Q8NEB5	264 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	UTP15	Q8TED0	518 aa	Known RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895	THOC3	Q96J01	351 aa	Known RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895	C3orf30	Q96M34	536 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	TUBB6	Q9BUF5	446 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.52	□□□□□ -0.25
ABR-223	ENST00000573895	AKTIP	Q9H8T0	292 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	ZNF160	Q9HCG1	818 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	SLAMF7	Q9NQ25	335 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	DMRT3	Q9NQL9	472 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	AHSP	Q9NZD4	102 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	HCN3	Q9P1Z3	774 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	B3GNT3	Q9Y2A9	372 aa		13.52	□□□□□ -0.25
ABR-223	ENST00000573895	COL12A1	Q99715	3063 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	ESPL1	Q14674	2120 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	MAGEB17	A8MXT2	336 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	JUN	P05412	331 aa	Known RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	SERPIND1	P05546	499 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	PRR35	P0CG20	571 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	ZNF888	P0CJ79	500 aa	Predicted RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	EFNA3	P52797	238 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	MLLT10	P55197	1068 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	EMX2	Q04743	252 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	DDX39B	Q13838	428 aa	Known RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	PCOLCE	Q15113	449 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	LSM12	Q3MHD2	195 aa	Known RBP	13.51	□□□□□ -0.25
ABR-223	ENST00000573895	MINDY4	Q4G0A6	757 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	DEFB134	Q4QY38	66 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	ATP6AP1L	Q52LC2	224 aa		13.51	□□□□□ -0.25
ABR-223	ENST00000573895	CRB2	Q5IJ48	1285 aa		13.51	□□□□□ -0.25

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