RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ZNF786Q8N393 782 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 OR2I1PQ8NGU4 316 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 SUN3Q8TAQ9 357 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 UBTD2Q8WUN7 234 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 C3orf30Q96M34 536 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 OR6C1Q96RD1 312 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 EHD1Q9H4M9 534 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 ZNF304Q9HCX3 659 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 CUTCQ9NTM9 273 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 PRODH2Q9UF12 536 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 CACNA1IQ9P0X4 2223 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 FNDC1Q4ZHG4 1894 aaPredicted RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 PRORSD1PA6NEY8 169 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 H0YIV9 168 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 ARHGAP33O14559 1287 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 SCRG1O75711 98 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 SERPINA1P01009 418 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 RPL4P36578 427 aaKnown RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 IDH2P48735 452 aaKnown RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 GSK3BP49841 420 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 EMP2P54851 167 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 CSNK1G2P78368 415 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 EIF3MQ7L2H7 374 aaKnown RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 IFI44Q8TCB0 444 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 PRAMEF33A0A0G2JMD5 474 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 M0QX08 132 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 ANPEPP15144 967 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 GLB1P16278 677 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 BMP7P18075 431 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 SDC1P18827 310 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 POU3F3P20264 500 aaPredicted RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 FGL2Q14314 439 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 TMEM107Q6UX40 140 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 RCBTB1Q8NDN9 531 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 NUP43Q8NFH3 380 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 RIT1Q92963 219 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 RELTQ969Z4 430 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 EGLN2Q96KS0 407 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 FCRL4Q96PJ5 515 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 TEFMQ96QE5 360 aaKnown RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 CDC6Q99741 560 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 GIN1Q9NXP7 522 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 DHCR7Q9UBM7 475 aaKnown RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 POMPQ9Y244 141 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 WDR45Q9Y484 360 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 SCAMP2O15127 329 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 CLOCKO15516 846 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 MC1RQ01726 317 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 TNFAIP8L3Q5GJ75 292 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 BLOC1S3Q6QNY0 202 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 RNF111Q6ZNA4 994 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 L3MBTL4Q8NA19 623 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ZNF248Q8NDW4 579 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 OR52J3Q8NH60 311 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 BTBD9Q96Q07 612 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ALOXE3Q9BYJ1 711 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ULBP3Q9BZM4 244 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 C20orf27Q9GZN8 174 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 RHBDL2Q9NX52 303 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 CAPN14A8MX76 684 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 hCG_2039718K7EN88 272 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 UQCRC2P22695 453 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 NXPH1P58417 271 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 E2F1Q01094 437 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 BNC1Q01954 994 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 NR1D2Q14995 579 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 IFI44LQ53G44 452 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 IKBIPQ70UQ0 350 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ABI3BPQ7Z7G0 1075 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 RANBP3LQ86VV4 465 aaPredicted RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 CLECL1Q8IZS7 167 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 CYP4Z2PQ8N1L4 340 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 DHRSXQ8N5I4 330 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ZNF527Q8NB42 609 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 MFSD9Q8NBP5 474 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 OR52L1Q8NGH7 329 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 RMND5BQ96G75 393 aaPredicted RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 ALKBH4Q9NXW9 302 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 CDV3Q9UKY7 258 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 ICKQ9UPZ9 632 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 PTRH2Q9Y3E5 179 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 EMC8O43402 210 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 RPP38P78345 283 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 ZIK1Q3SY52 487 aaPredicted RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 DCAF12Q5T6F0 453 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 NANOGP8Q6NSW7 305 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ZNF730Q6ZMV8 503 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 GALNT10Q86SR1 603 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 ZBTB46Q86UZ6 589 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 LSMEM2Q8N112 164 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 NFKBIDQ8NI38 313 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 SNRNP27Q8WVK2 155 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 PRRG4Q9BZD6 226 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 TRIM8Q9BZR9 551 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 SDR39U1Q9NRG7 319 aaPredicted RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 KLRF1Q9NZS2 232 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 USP36Q9P275 1121 aaKnown RBP9.61□□□□□ -0.87
SMG6-213ENST00000573166 SCDO00767 359 aa9.61□□□□□ -0.87
SMG6-213ENST00000573166 SIGLEC6O43699 453 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms