RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 BSGP35613 385 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 DCTP40126 519 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 CA7P43166 264 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 CLCN2P51788 898 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 TRAF3Q13114 568 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 SLC13A2Q13183 592 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 CUL3Q13618 768 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 AP5B1Q2VPB7 878 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 FAM153CQ494X1 144 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 Q6ZPB1 254 aaPredicted RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 MDGA2Q7Z553 956 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 FJX1Q86VR8 437 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 ZCCHC7Q8N3Z6 543 aaKnown RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 OR52B6Q8NGF0 335 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 UHMK1Q8TAS1 419 aaKnown RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 THAP3Q8WTV1 239 aaPredicted RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 RGMAQ96B86 450 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 NSUN5Q96P11 429 aaKnown RBP16.1■□□□□ 0.17
SMG6-212ENST00000573153 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 DEPPQ9NTK1 212 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 SEC14L3Q9UDX4 400 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 RNF11Q9Y3C5 154 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 CELSR2Q9HCU4 2923 aa16.1■□□□□ 0.17
SMG6-212ENST00000573153 A0A0A6YYD5 115 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ZNHIT1O43257 154 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 TMPRSS11DO60235 418 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 SMIM24O75264 130 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 EEDO75530 441 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 PRKRAO75569 313 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 ITGA10O75578 1167 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 CLDN9O95484 217 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 RPS17P08708 135 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 CD46P15529 392 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 NR0B1P51843 470 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 RPS13P62277 151 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 PHEXP78562 749 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ID2Q02363 134 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 OC90Q02509 493 aaPredicted RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 GGTA1PQ4G0N0 100 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 OR4C11Q6IEV9 310 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 HORMAD2Q8N7B1 307 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 TMEM178AQ8NBL3 297 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ZNF721Q8TF20 911 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ITLN2Q8WWU7 325 aaPredicted RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 CDK15Q96Q40 435 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 MTERF1Q99551 399 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 CENPKQ9BS16 269 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ALOXE3Q9BYJ1 711 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 DEFB126Q9BYW3 111 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 TSPAN10Q9H1Z9 355 aaPredicted RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 LIN28AQ9H9Z2 209 aaKnown RBP16.09■□□□□ 0.17
SMG6-212ENST00000573153 MS4A12Q9NXJ0 267 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ATG4BQ9Y4P1 393 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 ASB4Q9Y574 426 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 SPACA6W5XKT8 324 aa16.09■□□□□ 0.17
SMG6-212ENST00000573153 CRYBG3Q68DQ2 2970 aa16.08■□□□□ 0.17
SMG6-212ENST00000573153 TEX15Q9BXT5 2789 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 A0A1W2PS29 197 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 WASHC1A8K0Z3 465 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 IGKV3-11P04433 115 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 TNFRSF8P28908 595 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 SSR2P43308 183 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 CYB561P49447 251 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 NEK2P51955 445 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 BIKQ13323 160 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 SERTAD2Q14140 314 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 SLC29A2Q14542 456 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 C3AR1Q16581 482 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 CPSF6Q16630 551 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMG6-212ENST00000573153 C18orf63Q68DL7 685 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 TMEM132CQ8N3T6 1108 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 ACMSDQ8TDX5 336 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 UCN3Q969E3 161 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 PHF21BQ96EK2 531 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 CCDC120Q96HB5 630 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 SCYL1Q96KG9 808 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 NOL11Q9H8H0 719 aaKnown RBP16.08■□□□□ 0.16
SMG6-212ENST00000573153 DDX31Q9H8H2 851 aaKnown RBP16.08■□□□□ 0.16
SMG6-212ENST00000573153 ZNF225Q9UK10 706 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 FBXW2Q9UKT8 454 aa16.08■□□□□ 0.16
SMG6-212ENST00000573153 A0A1B0GUH1 482 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 PINLYPA6NC86 204 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 HRKO00198 91 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 PPP6CO00743 305 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 SEMA3DO95025 777 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 CLPSP04118 112 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 CCNG1P51959 295 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 HK2P52789 917 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 ADORA2A-AS1P86434 159 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 HSF1Q00613 529 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 TNFRSF17Q02223 184 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 SLAMF1Q13291 335 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 DDX39BQ13838 428 aaKnown RBP16.07■□□□□ 0.16
SMG6-212ENST00000573153 LYPD8Q6UX82 237 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 RPS27LQ71UM5 84 aaKnown RBP16.07■□□□□ 0.16
SMG6-212ENST00000573153 MYLK4Q86YV6 388 aaPredicted RBP16.07■□□□□ 0.16
SMG6-212ENST00000573153 SULF2Q8IWU5 870 aa16.07■□□□□ 0.16
SMG6-212ENST00000573153 OR4N5Q8IXE1 308 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms