RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TCRBV16S1A1N1A0A5B0 115 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 H3BQF6 201 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 SUV39H1O43463 412 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 LDB3O75112 727 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 KLK1P06870 262 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 FAM58BPP0C7Q3 252 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 DHRS4L1P0CG22 281 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 NR2F6P10588 404 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 HSD3B1P14060 373 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 HSD3B2P26439 372 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 TPP2P29144 1249 aaPredicted RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 PPP2R1BP30154 601 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 PGDP52209 483 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 ID2Q02363 134 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 UBAP2LQ14157 1087 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 MYBPC3Q14896 1274 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 CHI3L2Q15782 390 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 LACTB2Q53H82 288 aaPredicted RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 ARL13AQ5H913 290 aaPredicted RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 C18orf63Q68DL7 685 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 HIST2H2BCQ6DN03 193 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 MRM1Q6IN84 353 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 PAPD4Q6PIY7 484 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 ATG14Q6ZNE5 492 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 HDXQ7Z353 690 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 GPR180Q86V85 440 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 NUDCD3Q8IVD9 361 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 C1orf52Q8N6N3 182 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 PPP1R14CQ8TAE6 165 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 MGARPQ8TDB4 240 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 THOC3Q96J01 351 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 SLC25A18Q9H1K4 315 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 LYARQ9NX58 379 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 TEX10Q9NXF1 929 aaPredicted RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 VPS29Q9UBQ0 182 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 ASB4Q9Y574 426 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 PCDHGA9Q9Y5G4 932 aaKnown RBP14.82□□□□□ -0.04
CHD3-215ENST00000572750 CPAMD8Q8IZJ3 1885 aa14.82□□□□□ -0.04
CHD3-215ENST00000572750 NBASA2RRP1 2371 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 ARHGAP10A1A4S6 786 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 A8MUA0 341 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 CLDN4O14493 209 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 AZIN1O14977 448 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 LYPLA1O75608 230 aaPredicted RBP14.81□□□□□ -0.04
CHD3-215ENST00000572750 AIFM1O95831 613 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 PRR35P0CG20 571 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 UROSP10746 265 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 HSD17B7P56937 341 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 BTBD16Q32M84 506 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 SH2D4BQ5SQS7 431 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 CCNYL2Q5T2Q4 361 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 KANK2Q63ZY3 851 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 PAGE2Q7Z2X7 111 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 KBTBD2Q8IY47 623 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
CHD3-215ENST00000572750 OR6Y1Q8NGX8 325 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 IMMP1LQ96LU5 166 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 PAIP2Q9BPZ3 127 aaKnown RBP14.81□□□□□ -0.04
CHD3-215ENST00000572750 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 NMRK1Q9NWW6 199 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 AHSPQ9NZD4 102 aa14.81□□□□□ -0.04
CHD3-215ENST00000572750 G3BP2Q9UN86 482 aaKnown RBP14.81□□□□□ -0.04
CHD3-215ENST00000572750 HEMK1Q9Y5R4 338 aaPredicted RBP14.81□□□□□ -0.04
CHD3-215ENST00000572750 CRYBG3Q68DQ2 2970 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 A0A1W2PR48 441 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 CLEC18AA5D8T8 446 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 GLOD5A6NK44 160 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 BIRC5O15392 142 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 PROM1O43490 865 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 FGF17O60258 216 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 ITGAMP11215 1152 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 SFTPCP11686 197 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 BGNP21810 368 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 BUD31P41223 144 aaPredicted RBP14.8□□□□□ -0.04
CHD3-215ENST00000572750 MAPK12P53778 367 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 SOX8P57073 446 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 BTKQ06187 659 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 ACTN3Q08043 901 aaPredicted RBP14.8□□□□□ -0.04
CHD3-215ENST00000572750 IMPG1Q17R60 797 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 TTMPQ5BVD1 217 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 SPDYAQ5MJ70 313 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 AGBL2Q5U5Z8 902 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 IRAK1BP1Q5VVH5 260 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 TCTN3Q6NUS6 607 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 CLEC18BQ6UXF7 455 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 ASB18Q6ZVZ8 466 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 MMP21Q8N119 569 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 CLEC18CQ8NCF0 446 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 BRIX1Q8TDN6 353 aaKnown RBP14.8□□□□□ -0.04
CHD3-215ENST00000572750 APIPQ96GX9 242 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 LPAR4Q99677 370 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 EBPLQ9BY08 206 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 LHPPQ9H008 270 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 RPF2Q9H7B2 306 aaKnown RBP14.8□□□□□ -0.04
CHD3-215ENST00000572750 EML4Q9HC35 981 aaKnown RBP14.8□□□□□ -0.04
CHD3-215ENST00000572750 PNO1Q9NRX1 252 aaKnown RBP14.8□□□□□ -0.04
CHD3-215ENST00000572750 MS4A12Q9NXJ0 267 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 ADAM29Q9UKF5 820 aa14.8□□□□□ -0.04
CHD3-215ENST00000572750 SAGE2PA6NJ88 616 aa14.79□□□□□ -0.04
CHD3-215ENST00000572750 ITM2AO43736 263 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms