RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 EFEMP2O95967 443 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 IL3P08700 152 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 DSTNP60981 165 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 ELOAQ14241 798 aaKnown RBP16.64■□□□□ 0.25
SCARF1-205ENST00000571272 CEACAM20Q6UY09 585 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 GALNT12Q8IXK2 581 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 SNX18Q96RF0 628 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 CPEB1Q9BZB8 566 aaKnown RBP16.64■□□□□ 0.25
SCARF1-205ENST00000571272 UCK2Q9BZX2 261 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 GPBP1L1Q9HC44 474 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-205ENST00000571272 REV1Q9UBZ9 1251 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 TMCC3Q9ULS5 477 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 SEMA7AO75326 666 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 BCHEP06276 602 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 CLEC2LP0C7M8 214 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 NPPBP16860 134 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 PSPHP78330 225 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCARF1-205ENST00000571272 FAM131AQ6UXB0 335 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 HTR3DQ70Z44 454 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 IQCF1Q8N6M8 205 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 SETD6Q8TBK2 473 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 RAB8BQ92930 207 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 SLC6A18Q96N87 628 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM246Q9BRR3 403 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 RSPO3Q9BXY4 272 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-205ENST00000571272 SRRQ9GZT4 340 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 ABCB9Q9NP78 766 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 DMRT3Q9NQL9 472 aa16.64■□□□□ 0.25
SCARF1-205ENST00000571272 PAQR5Q9NXK6 330 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-205ENST00000571272 OSMP13725 252 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 TNNI3P19429 210 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 OPRD1P41143 372 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 POLR2LP62875 67 aaKnown RBP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 FAM71E1Q6IPT2 247 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM220Q6QAJ8 160 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 DEF8Q6ZN54 512 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 FOPNLQ96NB1 174 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 MIEF1Q9NQG6 463 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 SEC14L4Q9UDX3 406 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 SLC25A13Q9UJS0 675 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 PIPSLA2A3N6 862 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 ATG13O75143 517 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 AP2A2O94973 939 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 CSF2P04141 144 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 PIPP12273 146 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 ZNF91Q05481 1191 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 PDE7AQ13946 482 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 CASP12Q6UXS9 341 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 C2orf73Q8N5S3 287 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 WFDC6Q9BQY6 131 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 TSSK6Q9BXA6 273 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 MTG2Q9H4K7 406 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 STUB1Q9UNE7 303 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 C5orf58C9J3I9 102 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 ZNF670-ZNF695F2Z2N8 137 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 SOD2P04179 222 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 ALDH9A1P49189 494 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 XKP51811 444 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 MPP7Q5T2T1 576 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 REEP3Q6NUK4 255 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 OR9Q1Q8NGQ5 310 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 OR2A12Q8NGT7 310 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 MRPS31Q92665 395 aaKnown RBP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 REPS1Q96D71 796 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 FYTTD1Q96QD9 318 aaKnown RBP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 TVP23BQ9NYZ1 205 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 GULP1Q9UBP9 304 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 NUFIP1Q9UHK0 495 aaKnown RBP16.63■□□□□ 0.25
SCARF1-205ENST00000571272 SSR3Q9UNL2 185 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 CMAHPQ9Y471 501 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 DSPPQ9NZW4 1301 aa16.63■□□□□ 0.25
SCARF1-205ENST00000571272 CKAP5Q14008 2032 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 SLC5A10A0PJK1 596 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 ANKDD1BA6NHY2 528 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 LRRTM2O43300 516 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 SH3BP5O60239 455 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TPST2O60704 377 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 SSTR4P31391 388 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 CA8P35219 290 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM115Q12893 351 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 LARS2Q15031 903 aaKnown RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 DCST1Q5T197 706 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TMIGD1Q6UXZ0 262 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 TMEM25Q86YD3 366 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 CPXM2Q8N436 756 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 HORMAD2Q8N7B1 307 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 SLC38A5Q8WUX1 472 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 RANGRFQ9HD47 186 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 FZD3Q9NPG1 666 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 APOL3O95236 402 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 ADAP00813 363 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 ELAVL4P26378 380 aaKnown RBP16.62■□□□□ 0.25
SCARF1-205ENST00000571272 VIPR1P32241 457 aa16.62■□□□□ 0.25
SCARF1-205ENST00000571272 DDOSTP39656 456 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms